BLASTX nr result

ID: Cimicifuga21_contig00037037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037037
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812...    69   5e-10
emb|CBI39148.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    68   9e-10

>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 11/111 (9%)
 Frame = -1

Query: 330 PQEVMDEILSRLPVKSLLRFRCVSKTWLQILTLDPHFIQLHLDRLINSNNQNPSIVYMSP 151
           PQ+++ +IL+ LPVKSL+RF+CV K W Q+L  DP F++LHL R I  NN N   + ++ 
Sbjct: 5   PQDIIVDILTYLPVKSLVRFKCVCKPW-QLLISDPRFVKLHLKRAIEGNNINRQRLLVAA 63

Query: 150 KTLHYAKDYTACDDAIG----FELPFGTHEEYV-------IYGICNGLICI 31
           + L+ + D+ A  D  G     ELP+ +            I G C+GL+CI
Sbjct: 64  EPLYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRGSCDGLVCI 114


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
 Frame = -1

Query: 330 PQEVMDEILSRLPVKSLLRFRCVSKTWLQILTLDPHFIQLHLDRLINSNNQNPSIVYMSP 151
           P E++ EILSRLPVK L+RF+CVSKTW  +++  P F++ HL R     N N   +++S 
Sbjct: 9   PSEIISEILSRLPVKCLVRFKCVSKTWRSLIS-HPEFVKNHLKRTKEDTNANHYKIFLST 67

Query: 150 KTLHYAKDYTACDDA--------IGFELPFGTHEEYVIYGICNGLIC 34
              H + D  A  DA        + F + +  +    I G CNGL+C
Sbjct: 68  DP-HLSIDPEAYFDADDNLLTTQLKFPVSYPEYSYIEILGSCNGLVC 113


>ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812622 [Glycine max]
          Length = 975

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
 Frame = -1

Query: 330 PQEVMDEILSRLPVKSLLRFRCVSKTWLQILTLDPHFIQLHLDRLINSNNQNPSIVYMSP 151
           PQE++ EILS LPVK L+RFRCVSK W  ++   P FI+LHL RL  + +     V ++ 
Sbjct: 10  PQELIVEILSWLPVKPLMRFRCVSKAWYSLI-FHPSFIKLHLQRLPKNTH-----VLLTF 63

Query: 150 KTLHYAKDYTACDDAIGFELPFGTHEE--------YVIYGICNGLICIVDISEE 13
                   +T C      E P  T  +          ++G+CNGL+C+ D S +
Sbjct: 64  DNYECVTCFTPCSIRRLLENPSSTVIDGCHRFKYYNFVFGVCNGLVCLFDSSHK 117


>emb|CBI39148.3| unnamed protein product [Vitis vinifera]
          Length = 711

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
 Frame = -1

Query: 330 PQEVMDEILSRLPVKSLLRFRCVSKTWLQILTLDPHFIQLHLDRLINSNNQNPSIVYMSP 151
           P+ +M +ILSRLPVKSLLRFRCV K W  +++  P F++ HL       ++ P I  + P
Sbjct: 5   PEVIMVDILSRLPVKSLLRFRCVCKAWCTLIS-HPQFVETHL----RQQHKRPVIGLVVP 59

Query: 150 KTLHYAKDYTACDD-AIGFELPFG--THEEYVIYGICNGLICIVDISEEIYS 4
              H   D    DD A+  EL  G        +   CNGL+C+VD     YS
Sbjct: 60  ---HSVDDPLHKDDLAVDLELHLGIPNKRTTTVLDSCNGLLCVVDCYYGFYS 108


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = -1

Query: 330 PQEVMDEILSRLPVKSLLRFRCVSKTWLQILTLDPHFIQLHLDRLINSNNQNPSIVYMSP 151
           P+EV+ EILSRLPV+SLLRFR  SK+W  ++    H   LHL R +   + N S++    
Sbjct: 6   PREVLTEILSRLPVRSLLRFRSTSKSWKSLID-SQHLNWLHLTRSLTLTS-NTSLILRVD 63

Query: 150 KTLHYAKDYTACDDAIGFELPFGTHEEYV-IYGICNGLICIVDISEEI 10
             L Y  ++   D  +    P   +   + + G CNGL+CI +++++I
Sbjct: 64  SDL-YQTNFPTLDPPVSLNHPLMCYSNSITLLGSCNGLLCISNVADDI 110


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