BLASTX nr result

ID: Cimicifuga21_contig00037024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037024
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316085.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002311343.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
emb|CBI27293.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|NP_001059417.1| Os07g0298100 [Oryza sativa Japonica Group] g...    56   3e-06
gb|EEC81888.1| hypothetical protein OsI_25702 [Oryza sativa Indi...    56   3e-06

>ref|XP_002316085.1| predicted protein [Populus trichocarpa] gi|222865125|gb|EEF02256.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +3

Query: 276 VMERPEGHDPNRIPSTVFARTKSTAPVEWSVQSNESLFS 392
           VMERP G+DP RIPS++F + K TAP++WSV SNESLFS
Sbjct: 218 VMERPGGYDPLRIPSSIFEKNKGTAPMDWSVASNESLFS 256


>ref|XP_002311343.1| predicted protein [Populus trichocarpa] gi|222851163|gb|EEE88710.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +3

Query: 276 VMERPEGHDPNRIPSTVFARTKSTAPVEWSVQSNESLFS 392
           VMERP G+DP RIPS++F R K  AP++WSV SNESLFS
Sbjct: 204 VMERPGGYDPFRIPSSIFERNKGPAPMDWSVASNESLFS 242


>emb|CBI27293.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/103 (37%), Positives = 50/103 (48%)
 Frame = +3

Query: 84  SVETANPFQLDEDPHLAVRDSNTSHDLVSSNPASPQPTFXXXXXXXXXXXXXXXXXXXXX 263
           S+++ N F  D+D  L ++D N   D     PASP                         
Sbjct: 98  SLDSINIFSYDKDAQLELKDEN---DTGFPGPASPSQVSDLRQETSFHCMSPTQSPPVQS 154

Query: 264 XXXXVMERPEGHDPNRIPSTVFARTKSTAPVEWSVQSNESLFS 392
                MER    +P RIPS+VFAR++ST P+EWSV SNESLFS
Sbjct: 155 -----MERSGDDEPYRIPSSVFARSQSTTPLEWSVASNESLFS 192


>ref|NP_001059417.1| Os07g0298100 [Oryza sativa Japonica Group]
           gi|34394314|dbj|BAC84796.1| unknown protein [Oryza
           sativa Japonica Group] gi|113610953|dbj|BAF21331.1|
           Os07g0298100 [Oryza sativa Japonica Group]
           gi|215701263|dbj|BAG92687.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 299

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 291 EGHDPNRIPSTVFARTKSTAPVEWSVQSNESLFS 392
           E HDP RIPS VFAR+KS+ P +WS+ SNESLFS
Sbjct: 87  EPHDPKRIPSAVFARSKSSTPTDWSITSNESLFS 120


>gb|EEC81888.1| hypothetical protein OsI_25702 [Oryza sativa Indica Group]
          Length = 299

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 291 EGHDPNRIPSTVFARTKSTAPVEWSVQSNESLFS 392
           E HDP RIPS VFAR+KS+ P +WS+ SNESLFS
Sbjct: 87  EPHDPKRIPSAVFARSKSSTPTDWSITSNESLFS 120


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