BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037014
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73911.1| polyprotein [Citrus sinensis]                           73   3e-11
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               72   5e-11
gb|AFB73912.1| polyprotein [Citrus sinensis]                           71   1e-10
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]    69   3e-10
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               69   4e-10

>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +1

Query: 61   EERIQHDDIQLRRSTRQRQIHEYLNDFEVSINNCTVTSCFLMGIASEDEPTHYHEA---A 231
            +E ++ +  ++RRSTR+R+   + +++   IN   V  C L     + EP+ +HEA   +
Sbjct: 749  QEPVESEAPEVRRSTRERRPPTWHSEYVTEIN---VAYCLL---TEDGEPSTFHEALNSS 802

Query: 232  EITEWNAAMREEIDALHENSTWELVPKLKDANLVTCKWVFKLK 360
            ++  W  AM+EEI+ALH+N TWELVP  +    +  KWV+K+K
Sbjct: 803  DVALWMTAMQEEIEALHKNKTWELVPLPRGRKAIGNKWVYKIK 845


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
 Frame = +1

Query: 19   DTGSQERGGHASPFEERIQHDDIQ--LRRSTRQRQIHEYLNDFEVSINN--CTVTSCFLM 186
            +   +     A P  E  + DD+   +RRSTRQ Q   + +D+ ++ ++  C +T     
Sbjct: 729  EKSKESDSSEAEPVHEEQEPDDVNNGVRRSTRQTQKPSWQSDYVMTSHDAYCLITE---- 784

Query: 187  GIASEDEPTHYHEA---AEITEWNAAMREEIDALHENSTWELVPKLKDANLVTCKWVFKL 357
                E EP+ +HEA   ++ ++W  AM EE++ALH N TWELV   K    +  KWV+K+
Sbjct: 785  ----EGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKI 840

Query: 358  K 360
            K
Sbjct: 841  K 841


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = +1

Query: 61   EERIQHDDIQLRRSTRQRQIHEYLNDFEVSINNCTVTSCFLMGIASEDEPTHYHEAA--- 231
            +E ++ +  ++RRSTR+R+   + +++   IN   V  C L     + EP+ +HEA    
Sbjct: 749  QEPVESEAPEVRRSTRERRPPTWHSEYVTEIN---VAYCLL---TEDGEPSTFHEALNSL 802

Query: 232  EITEWNAAMREEIDALHENSTWELVPKLKDANLVTCKWVFKLK 360
            ++  W  AM+EEI+ALH+N TWELVP       +  KWV+K+K
Sbjct: 803  DVALWMTAMQEEIEALHKNKTWELVPLPHGRKAIGNKWVYKIK 845


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
 Frame = +1

Query: 16   GDTGSQER------GGHASPFEERIQHD---DIQLRRSTRQRQIHEYLNDFEVSINNCTV 168
            GD G  E       G H  P EE    +    I LRRS R ++             N   
Sbjct: 737  GDIGDDETQSPWQTGVHGQPSEEGEPSEIEAPIPLRRSARTKK------------PNPKY 784

Query: 169  TSCFLMGIASEDEPTHYHEAAEITEWNAAMREEIDALHENSTWELVPKLKDANLVTCKWV 348
             +  ++  A+  EP  + EA +  +W+ AM+EEI AL  N TWELVPK +D   ++CKWV
Sbjct: 785  ANVAIVEDANTKEPETFAEAFQNPDWSKAMKEEIAALKRNQTWELVPKPRDVEPISCKWV 844

Query: 349  FKLK 360
            +K+K
Sbjct: 845  YKIK 848


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 7/121 (5%)
 Frame = +1

Query: 19   DTGSQERGGHASPFEERIQHDDIQ--LRRSTRQRQIHEYLNDFEVSINN--CTVTSCFLM 186
            +   +     A    E  + DD+   +RRSTRQ Q   + +D+ ++ ++  C +T     
Sbjct: 729  EKSKESDSSEAESVHEEQEPDDVNDGVRRSTRQTQKPSWQSDYVMTSHDAYCLITE---- 784

Query: 187  GIASEDEPTHYHEA---AEITEWNAAMREEIDALHENSTWELVPKLKDANLVTCKWVFKL 357
                E EP+ +HEA   ++ ++W  AM EE++ALH N TWELV   K    +  KWV+K+
Sbjct: 785  ----EGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKI 840

Query: 358  K 360
            K
Sbjct: 841  K 841