BLASTX nr result

ID: Cimicifuga21_contig00036988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036988
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160202.1| PREDICTED: ABC transporter G family member 3...   114   6e-24
ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrat...   114   8e-24
gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]        114   8e-24
ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis...   114   8e-24
ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23

>ref|XP_004160202.1| PREDICTED: ABC transporter G family member 31-like [Cucumis
           sativus]
          Length = 743

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/87 (64%), Positives = 62/87 (71%)
 Frame = -2

Query: 263 FAPGAGXXXXXXXXXFSVHQMALGLFRMMAAVARDMIIANTFGSTAXXXXXXXXXXXLPK 84
           FAP AG         FSVHQMA+GLFR+MAA+ARDM+IANTFGS A           +PK
Sbjct: 637 FAPSAGRFFRFMFLLFSVHQMAIGLFRLMAAIARDMVIANTFGSAALLIIFLLGGFIIPK 696

Query: 83  ASIKPWWVWAFWLSPLSYGQRAISVNE 3
             IKPWW WAFW+SPLSYGQRAISVNE
Sbjct: 697 EMIKPWWSWAFWVSPLSYGQRAISVNE 723


>ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325079|gb|EFH55499.1| ATPDR3/PDR3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1428

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/86 (65%), Positives = 62/86 (72%)
 Frame = -2

Query: 260 APGAGXXXXXXXXXFSVHQMALGLFRMMAAVARDMIIANTFGSTAXXXXXXXXXXXLPKA 81
           AP AG         FSVHQMALGLFRMMA++ARDM+IANTFGS A           +PKA
Sbjct: 639 APSAGRFFRYMLLLFSVHQMALGLFRMMASLARDMVIANTFGSAAILVVFLLGGFVIPKA 698

Query: 80  SIKPWWVWAFWLSPLSYGQRAISVNE 3
            IKPWWVW FW+SPLSYGQRAI+VNE
Sbjct: 699 DIKPWWVWGFWVSPLSYGQRAIAVNE 724


>gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]
          Length = 1443

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/86 (65%), Positives = 62/86 (72%)
 Frame = -2

Query: 260 APGAGXXXXXXXXXFSVHQMALGLFRMMAAVARDMIIANTFGSTAXXXXXXXXXXXLPKA 81
           AP AG         FSVHQMALGLFRMMA++ARDM+IANTFGS A           +PKA
Sbjct: 656 APSAGRFFRYMLLLFSVHQMALGLFRMMASLARDMVIANTFGSAAILIVFLLGGFVIPKA 715

Query: 80  SIKPWWVWAFWLSPLSYGQRAISVNE 3
            IKPWWVW FW+SPLSYGQRAI+VNE
Sbjct: 716 DIKPWWVWGFWVSPLSYGQRAIAVNE 741


>ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis thaliana]
           gi|75326886|sp|Q7PC88.1|AB31G_ARATH RecName: Full=ABC
           transporter G family member 31; Short=ABC transporter
           ABCG.31; Short=AtABCG31; AltName: Full=Probable
           pleiotropic drug resistance protein 3
           gi|28144325|tpg|DAA00871.1| TPA_exp: PDR3 ABC
           transporter [Arabidopsis thaliana]
           gi|330253231|gb|AEC08325.1| ABC transporter G family
           member 31 [Arabidopsis thaliana]
          Length = 1426

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/86 (65%), Positives = 62/86 (72%)
 Frame = -2

Query: 260 APGAGXXXXXXXXXFSVHQMALGLFRMMAAVARDMIIANTFGSTAXXXXXXXXXXXLPKA 81
           AP AG         FSVHQMALGLFRMMA++ARDM+IANTFGS A           +PKA
Sbjct: 639 APSAGRFFRYMLLLFSVHQMALGLFRMMASLARDMVIANTFGSAAILIVFLLGGFVIPKA 698

Query: 80  SIKPWWVWAFWLSPLSYGQRAISVNE 3
            IKPWWVW FW+SPLSYGQRAI+VNE
Sbjct: 699 DIKPWWVWGFWVSPLSYGQRAIAVNE 724


>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/87 (59%), Positives = 62/87 (71%)
 Frame = -2

Query: 263 FAPGAGXXXXXXXXXFSVHQMALGLFRMMAAVARDMIIANTFGSTAXXXXXXXXXXXLPK 84
           FAPGAG         FS+HQMALGLFR M ++ARD+++ANTFGS A           +PK
Sbjct: 636 FAPGAGRFFRFMLLLFSIHQMALGLFRTMGSIARDLVVANTFGSAALLAIFLLGGFIIPK 695

Query: 83  ASIKPWWVWAFWLSPLSYGQRAISVNE 3
           A IKPWW+W +WLSPL+YGQRAISVNE
Sbjct: 696 AMIKPWWIWGYWLSPLTYGQRAISVNE 722


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