BLASTX nr result

ID: Cimicifuga21_contig00036985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036985
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vi...   102   3e-20
ref|XP_002526656.1| importin beta-1, putative [Ricinus communis]...   100   2e-19
emb|CAN74890.1| hypothetical protein VITISV_038853 [Vitis vinifera]    91   7e-17
ref|NP_001154598.1| armadillo/beta-catenin-like repeat-containin...    90   2e-16
dbj|BAF01639.1| hypothetical protein [Arabidopsis thaliana]            90   2e-16

>ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vinifera]
            gi|297735635|emb|CBI18129.3| unnamed protein product
            [Vitis vinifera]
          Length = 872

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/69 (75%), Positives = 57/69 (82%)
 Frame = +3

Query: 72   LELNRRGICRDKSVTKVVVAVMGDLADTLGSNIKILFKDLTFYGKFLDECLESDDEQLKE 251
            +EL  R   R++SVTK  VAVMGDLADTLGSN+KILFKD TF   FL ECLESDDEQLKE
Sbjct: 798  IELVSRDRHREESVTKAAVAVMGDLADTLGSNMKILFKDRTFCADFLGECLESDDEQLKE 857

Query: 252  TASWTQGMI 278
            TA+WTQGMI
Sbjct: 858  TATWTQGMI 866


>ref|XP_002526656.1| importin beta-1, putative [Ricinus communis]
            gi|223533956|gb|EEF35678.1| importin beta-1, putative
            [Ricinus communis]
          Length = 872

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = +3

Query: 72   LELNRRGICRDKSVTKVVVAVMGDLADTLGSNIKILFKDLTFYGKFLDECLESDDEQLKE 251
            +E+  R   RD+SVTK  VAVMGDLAD LGSN KILFKD TFY +FL ECL+SDDEQLKE
Sbjct: 798  IEMVFRDSQRDESVTKAAVAVMGDLADALGSNTKILFKDKTFYSEFLGECLQSDDEQLKE 857

Query: 252  TASWTQGMI 278
            TA+WTQ MI
Sbjct: 858  TANWTQVMI 866


>emb|CAN74890.1| hypothetical protein VITISV_038853 [Vitis vinifera]
          Length = 513

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/69 (66%), Positives = 53/69 (76%)
 Frame = +3

Query: 72  LELNRRGICRDKSVTKVVVAVMGDLADTLGSNIKILFKDLTFYGKFLDECLESDDEQLKE 251
           +EL  R   R++S+TK  VAVMGDL D L SN+KILFKD TF  +FL ECLESDDEQLKE
Sbjct: 254 IELVSRDEHREESITKAAVAVMGDLVDILASNMKILFKDRTFCEEFLGECLESDDEQLKE 313

Query: 252 TASWTQGMI 278
           T +WTQ MI
Sbjct: 314 TTTWTQEMI 322


>ref|NP_001154598.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
            thaliana] gi|332641179|gb|AEE74700.1|
            armadillo/beta-catenin-like repeat-containing protein
            [Arabidopsis thaliana]
          Length = 873

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/69 (62%), Positives = 53/69 (76%)
 Frame = +3

Query: 72   LELNRRGICRDKSVTKVVVAVMGDLADTLGSNIKILFKDLTFYGKFLDECLESDDEQLKE 251
            +EL  +   RD+SVTK  VA MGDLAD +G N K LF++ TF+G+FL+ECLES+DE LK 
Sbjct: 798  VELVSKDPLRDESVTKAAVAAMGDLADVVGENTKQLFQNFTFFGEFLNECLESEDEDLKV 857

Query: 252  TASWTQGMI 278
            TA WTQGMI
Sbjct: 858  TARWTQGMI 866


>dbj|BAF01639.1| hypothetical protein [Arabidopsis thaliana]
          Length = 657

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/69 (62%), Positives = 53/69 (76%)
 Frame = +3

Query: 72  LELNRRGICRDKSVTKVVVAVMGDLADTLGSNIKILFKDLTFYGKFLDECLESDDEQLKE 251
           +EL  +   RD+SVTK  VA MGDLAD +G N K LF++ TF+G+FL+ECLES+DE LK 
Sbjct: 582 VELVSKDPLRDESVTKAAVAAMGDLADVVGENTKQLFQNFTFFGEFLNECLESEDEDLKV 641

Query: 252 TASWTQGMI 278
           TA WTQGMI
Sbjct: 642 TARWTQGMI 650


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