BLASTX nr result

ID: Cimicifuga21_contig00036974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036974
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003576531.1| PREDICTED: uncharacterized protein LOC100827...    64   1e-08
tpg|DAA61490.1| TPA: putative RING zinc finger domain superfamil...    64   1e-08
gb|ACN36711.1| unknown [Zea mays]                                      64   1e-08
gb|ACN35109.1| unknown [Zea mays] gi|414885478|tpg|DAA61492.1| T...    64   1e-08

>ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|222841400|gb|EEE78947.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -1

Query: 533 CKVPLHSYISCEDFQRLYADEGGKEDAMLRKLAQEKKWNRCP 408
           C VP HS I CE+FQRL  DE G+ED MLR+LA++KKW+RCP
Sbjct: 225 CSVPWHSGIECEEFQRLNEDERGREDLMLRELAKDKKWSRCP 266


>ref|XP_003576531.1| PREDICTED: uncharacterized protein LOC100827708 [Brachypodium
           distachyon]
          Length = 532

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = -1

Query: 533 CKVPLHSYISCEDFQRLYADEGGKEDAMLRKLAQEKKWNRCPSYVIVRSRSA 378
           CKVP H  + C +FQRL  DE G+ED +L+K+AQEKKW RCP   +   R A
Sbjct: 329 CKVPWHDGVDCAEFQRLGDDERGREDLLLKKVAQEKKWQRCPKCKVYVERVA 380


>tpg|DAA61490.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
           [Zea mays] gi|414885477|tpg|DAA61491.1| TPA: putative
           RING zinc finger domain superfamily protein isoform 2
           [Zea mays]
          Length = 349

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -1

Query: 533 CKVPLHSYISCEDFQRLYADEGGKEDAMLRKLAQEKKWNRCPSYVIVRSR 384
           CKVP H+ ++C +FQRL  DE G+ED +LRK+AQE KW RCP   I   R
Sbjct: 263 CKVPWHAGVTCAEFQRLGKDERGREDLLLRKVAQESKWQRCPKCKIYVER 312


>gb|ACN36711.1| unknown [Zea mays]
          Length = 349

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -1

Query: 533 CKVPLHSYISCEDFQRLYADEGGKEDAMLRKLAQEKKWNRCPSYVIVRSR 384
           CKVP H+ ++C +FQRL  DE G+ED +LRK+AQE KW RCP   I   R
Sbjct: 263 CKVPWHAGVTCAEFQRLGKDERGREDLLLRKVAQESKWQRCPKCKIYVER 312


>gb|ACN35109.1| unknown [Zea mays] gi|414885478|tpg|DAA61492.1| TPA: putative RING
           zinc finger domain superfamily protein [Zea mays]
          Length = 332

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -1

Query: 533 CKVPLHSYISCEDFQRLYADEGGKEDAMLRKLAQEKKWNRCPSYVIVRSR 384
           CKVP H+ ++C +FQRL  DE G+ED +LRK+AQE KW RCP   I   R
Sbjct: 263 CKVPWHAGVTCAEFQRLGKDERGREDLLLRKVAQESKWQRCPKCKIYVER 312


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