BLASTX nr result

ID: Cimicifuga21_contig00036950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036950
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF81426.1| NBS-LRR type disease resistance protein [Populus ...    79   4e-13
ref|XP_002332539.1| BED finger-nbs-lrr resistance protein [Popul...    79   5e-13
ref|XP_002333549.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|ABF81422.1| NBS type disease resistance protein [Populus tric...    75   7e-12
ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Popul...    74   1e-11

>gb|ABF81426.1| NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1394

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/88 (48%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   PEDYSIHPEYLIDHWVMEGLIDG-KSIEDEVDRGHDVLNNLKRRCMLEDDPQYDDERLFL 178
           PED+ I  E+LI + + EG+I G KS E E ++GH +LN L+R C+LE   ++ D+  + 
Sbjct: 707 PEDFMIPREHLIAYLIDEGVIKGLKSREAEFNKGHSMLNKLERVCLLESAEKWGDDERY- 765

Query: 179 NNVKMHDLIRDMALHITKTNPRFMVKAG 262
             VKMHDLIRDMA+ I + N + MVKAG
Sbjct: 766 --VKMHDLIRDMAIQIQQENSQCMVKAG 791


>ref|XP_002332539.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832683|gb|EEE71160.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 875

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   PEDYSIHPEYLIDHWVMEGLIDGKSI-EDEVDRGHDVLNNLKRRCMLEDDP-QYDDERLF 175
           PEDY I  E LI + + EG+I GK   ED  D GH +LN L+  C+LE     YDD R  
Sbjct: 578 PEDYMIEREELIGYLIDEGIIKGKRRREDAFDEGHTMLNRLENVCLLESARVNYDDNR-- 635

Query: 176 LNNVKMHDLIRDMALHITKTNPRFMVKAG 262
              VKMHDLIRDMA+ I   N ++MVKAG
Sbjct: 636 --RVKMHDLIRDMAIQILLENSQYMVKAG 662


>ref|XP_002333549.1| predicted protein [Populus trichocarpa] gi|222837186|gb|EEE75565.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   PEDYSIHPEYLIDHWVMEGLIDG-KSIEDEVDRGHDVLNNLKRRCMLED-DPQYDDERLF 175
           PED+ I  E LI + + EG+I G KS E E ++GH +LN L+R C+LE    ++DD+R  
Sbjct: 67  PEDFRIRREDLIAYLIDEGVIKGLKSKEAEFNKGHSMLNKLERVCLLESAKEEFDDDRY- 125

Query: 176 LNNVKMHDLIRDMALHITKTNPRFMVKAG 262
              VKMHDL+RDMA+ I + N + MVKAG
Sbjct: 126 ---VKMHDLVRDMAIQILEKNSQGMVKAG 151


>gb|ABF81422.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 652

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   PEDYSIHPEYLIDHWVMEGLIDG-KSIEDEVDRGHDVLNNLKRRCMLEDDP-QYDDERLF 175
           PED  I  E LI + + EG+I G KS E E ++GH +LN L+R C+LE     YDD+R  
Sbjct: 509 PEDVEILREDLIAYLIDEGVIKGLKSREAEFNKGHSMLNKLERACLLEGAKIGYDDDRY- 567

Query: 176 LNNVKMHDLIRDMALHITKTNPRFMVKAG 262
              VKMHDL+RDMA+ I + N + MVKAG
Sbjct: 568 ---VKMHDLVRDMAIQILEDNSQGMVKAG 593


>ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222835868|gb|EEE74289.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1077

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   PEDYSIHPEYLIDHWVMEGLIDGKSI-EDEVDRGHDVLNNLKRRCMLEDDPQYDDERLFL 178
           PED+ I  E LI + + EG+I G +  E E D+GH +LN L+  C+LED   Y   R  +
Sbjct: 498 PEDFMIPREDLIAYLIDEGVIKGLTRREAEFDKGHTMLNKLESACLLEDAKLYSGRRC-V 556

Query: 179 NNVKMHDLIRDMALHITKTNPRFMVKAG 262
             VKMHDLIRDMA+ I + N + MVKAG
Sbjct: 557 RAVKMHDLIRDMAIQILQENSQGMVKAG 584


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