BLASTX nr result

ID: Cimicifuga21_contig00036940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036940
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/72 (50%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211 MPSMVSTL--SLQLNSITPFSPKFKEPTISEFKPTHLRLQTRILNNPITRINPVSTRPRR 38
           MPS+VS+   SLQL S +  SP F  P+   +KPT L L  R      T ++ VSTRPRR
Sbjct: 1   MPSIVSSSPSSLQLYSSSTLSPTFTLPSSRFYKPTRLHLPPR---PSTTVVSCVSTRPRR 57

Query: 37  KSGSKVDKSETE 2
           K G K DKSE E
Sbjct: 58  KPGPKPDKSEVE 69


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