BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036939
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16853.1| unknown [Picea sitchensis]                             234   6e-62
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   232   2e-61
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   232   2e-61
ref|XP_002513521.1| transcription initiation factor iib, putativ...   232   6e-61
dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare]    228   8e-61

>gb|ABR16853.1| unknown [Picea sitchensis]
          Length = 313

 Score =  234 bits (596), Expect(2) = 6e-62
 Identities = 113/125 (90%), Positives = 117/125 (93%)
 Frame = -2

Query: 411 VLCPECKKSTEVVLDHSAGDTVCFECGLVLEAHSIDETSEWRTFANESGENDPVRVGGPS 232
           V CP+CKK TEVV DHSAGDTVC ECGLVLEAHSIDETSEWRTFANE+G+NDPVRVGGPS
Sbjct: 5   VSCPDCKKQTEVVFDHSAGDTVCVECGLVLEAHSIDETSEWRTFANETGDNDPVRVGGPS 64

Query: 231 NPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTIVIMSDRLGLVA 52
           NPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLI AFKTI  MSDRLGLVA
Sbjct: 65  NPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIMAFKTIGTMSDRLGLVA 124

Query: 51  TIKSQ 37
           TIK +
Sbjct: 125 TIKDR 129



 Score = 28.9 bits (63), Expect(2) = 6e-62
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 44  RANEIYKKVEDLKS 3
           RANEIYKKVED KS
Sbjct: 129 RANEIYKKVEDSKS 142


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  232 bits (591), Expect(2) = 2e-61
 Identities = 111/128 (86%), Positives = 117/128 (91%)
 Frame = -2

Query: 420 MADVLCPECKKSTEVVLDHSAGDTVCFECGLVLEAHSIDETSEWRTFANESGENDPVRVG 241
           MAD  C +CKK+TEVV DHSAGDTVC ECGLVLE+HSIDETSEWRTFANESG+NDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 240 GPSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTIVIMSDRLG 61
           GPSNPLLTDGGLSTVI+KPNG SGDFLSSSLGRWQNRGSNPDR LI AFKTI  MSDRLG
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 60  LVATIKSQ 37
           LVATIK +
Sbjct: 121 LVATIKDR 128



 Score = 28.9 bits (63), Expect(2) = 2e-61
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 44  RANEIYKKVEDLKS 3
           RANEIYKKVED KS
Sbjct: 128 RANEIYKKVEDQKS 141


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  232 bits (591), Expect(2) = 2e-61
 Identities = 111/128 (86%), Positives = 117/128 (91%)
 Frame = -2

Query: 420 MADVLCPECKKSTEVVLDHSAGDTVCFECGLVLEAHSIDETSEWRTFANESGENDPVRVG 241
           MAD  C +CKK+TEVV DHSAGDTVC ECGLVLE+HSIDETSEWRTFANESG+NDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 240 GPSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTIVIMSDRLG 61
           GPSNPLLTDGGLSTVI+KPNG SGDFLSSSLGRWQNRGSNPDR LI AFKTI  MSDRLG
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 60  LVATIKSQ 37
           LVATIK +
Sbjct: 121 LVATIKDR 128



 Score = 28.9 bits (63), Expect(2) = 2e-61
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 44  RANEIYKKVEDLKS 3
           RANEIYKKVED KS
Sbjct: 128 RANEIYKKVEDQKS 141


>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223547429|gb|EEF48924.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  232 bits (591), Expect(2) = 6e-61
 Identities = 111/128 (86%), Positives = 117/128 (91%)
 Frame = -2

Query: 420 MADVLCPECKKSTEVVLDHSAGDTVCFECGLVLEAHSIDETSEWRTFANESGENDPVRVG 241
           MAD  CP+CK+ TEVV DHSAGDTVC ECGLVLE+HSIDETSEWRTFANES +NDPVRVG
Sbjct: 1   MADTYCPDCKRPTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESADNDPVRVG 60

Query: 240 GPSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTIVIMSDRLG 61
           GPSNPLL DGGLSTVISKP GASGDFL+SSLGRWQNRGSNPDRSLIQAFKTI  MSDRLG
Sbjct: 61  GPSNPLLADGGLSTVISKPTGASGDFLTSSLGRWQNRGSNPDRSLIQAFKTIATMSDRLG 120

Query: 60  LVATIKSQ 37
           LVATIK +
Sbjct: 121 LVATIKDR 128



 Score = 27.3 bits (59), Expect(2) = 6e-61
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 44  RANEIYKKVEDLK 6
           RANEIYKKVED K
Sbjct: 128 RANEIYKKVEDQK 140


>dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 312

 Score =  228 bits (580), Expect(2) = 8e-61
 Identities = 108/128 (84%), Positives = 116/128 (90%)
 Frame = -2

Query: 420 MADVLCPECKKSTEVVLDHSAGDTVCFECGLVLEAHSIDETSEWRTFANESGENDPVRVG 241
           M+D  CP+CKK TEV  DHSAGDTVC ECGLVLEAHS+DETSEWRTFANES +NDPVRVG
Sbjct: 1   MSDTYCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 240 GPSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTIVIMSDRLG 61
           GPSNPLLTDGGLSTVI+KPNGA GDFLSSSLGRWQNRGSNPDRSLI AF+TI  M+DRLG
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGAHGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 60  LVATIKSQ 37
           LVATIK +
Sbjct: 121 LVATIKDR 128



 Score = 31.2 bits (69), Expect(2) = 8e-61
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -3

Query: 44  RANEIYKKVEDLKS 3
           RANEIYKKVEDLKS
Sbjct: 128 RANEIYKKVEDLKS 141