BLASTX nr result

ID: Cimicifuga21_contig00036930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036930
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303718.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002530118.1| ubiquitin-protein ligase, putative [Ricinus ...    75   4e-12
ref|XP_002299383.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003547403.1| PREDICTED: uncharacterized protein LOC100796...    67   1e-09
emb|CBI27383.3| unnamed protein product [Vitis vinifera]               64   1e-08

>ref|XP_002303718.1| predicted protein [Populus trichocarpa] gi|222841150|gb|EEE78697.1|
           predicted protein [Populus trichocarpa]
          Length = 816

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
 Frame = +2

Query: 5   NWQNPDASEGAKVAA--IVKRLTSSNGNEKDQEQTVVCEPSSSEH---SVSDQREQGNLT 169
           +++N DA E  KV    I++RLTS + N+ DQ      +  S E+   SVSD+ EQ  L+
Sbjct: 248 HFRNTDAGEPEKVKIVDIIRRLTSDS-NDDDQPLNGAGDGLSRENRHSSVSDRTEQKVLS 306

Query: 170 FNRKRLRVRGRQATKDLLMQMMHERYRELGKLAERRAVSLFPQRGRIQ 313
                 ++RGRQA  DLL+QM  ER+RELG L ER AVS F QRGRIQ
Sbjct: 307 QVVNSPKIRGRQAFNDLLLQMEQERHRELGSLGERHAVSKFAQRGRIQ 354


>ref|XP_002530118.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223530372|gb|EEF32262.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 740

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 51/106 (48%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   FNWQNPDASEGAKVAAIVKRLTSSNGNEKDQEQ-TVVCEPSSSEHSV-SDQREQGNLTFN 175
           F   +   SE  ++A I+KR TS +    D EQ + V +P S  HS  SDQ E   L+  
Sbjct: 259 FTCSDAGESERVRIADIIKRFTSDS---IDHEQGSSVGDPPSRRHSCGSDQSELRALSQI 315

Query: 176 RKRLRVRGRQATKDLLMQMMHERYRELGKLAERRAVSLFPQRGRIQ 313
               ++RGRQA  DLL QM  ER REL  LAER++VS FPQRGRIQ
Sbjct: 316 VNSPKIRGRQAFNDLLYQMEQERLRELESLAERQSVSRFPQRGRIQ 361


>ref|XP_002299383.1| predicted protein [Populus trichocarpa] gi|222846641|gb|EEE84188.1|
           predicted protein [Populus trichocarpa]
          Length = 923

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
 Frame = +2

Query: 5   NWQNPDASEG--AKVAAIVKRLTSSNGNEKDQEQTVVCEPSSSEH---SVSDQREQGNLT 169
           ++++ DA E    K+  I++RLTS +GN+ DQ+     +  S E    S SD+ EQ  L 
Sbjct: 273 HFRDTDAGEPDKVKIVDIIRRLTS-DGNDHDQKLNSAGDCLSRERRNSSGSDRTEQKVLP 331

Query: 170 FNRKRLRVRGRQATKDLLMQMMHERYRELGKLAERRAVSLFPQRGRIQ 313
                 ++RGRQA  DLL+QM  ER+RELG L ER+AVS F QRGRIQ
Sbjct: 332 QVVNPPKIRGRQAFNDLLLQMEQERHRELGWLGERQAVSKFSQRGRIQ 379


>ref|XP_003547403.1| PREDICTED: uncharacterized protein LOC100796627 [Glycine max]
          Length = 917

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 24/127 (18%)
 Frame = +2

Query: 5   NWQNPDAS---------EGAKVAAIVKRLTSSNGNEK-------DQEQ-----TVVCEPS 121
           +W++ D S         +  +VA I+K+LT++N N+        D E      +V   P 
Sbjct: 245 DWESSDHSLSPSGRSERDRVRVADIIKKLTATNPNQSPTPSFADDNEHEGYGSSVTGSPC 304

Query: 122 SSEHSVSDQREQGNLTFNRK---RLRVRGRQATKDLLMQMMHERYRELGKLAERRAVSLF 292
                 + Q++Q +   N++    LR+RGR+A  DLL QM ++R+ EL  L ER AVS F
Sbjct: 305 RERECGNQQQQQQHSEQNQRVNCSLRIRGRRAYNDLLAQMKNDRHGELNNLVERGAVSKF 364

Query: 293 PQRGRIQ 313
           PQRGRIQ
Sbjct: 365 PQRGRIQ 371


>emb|CBI27383.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
 Frame = +2

Query: 11  QNPDASEG--AKVAAIVKRLTSSNGNEKDQEQTVVCEPSSSEHSVSDQREQGNLTFNRKR 184
           Q+ DA E    +VA I++RLTS  G  + Q   + C       S  +  EQ  +T  R  
Sbjct: 240 QDSDAGENERVRVADIIRRLTS--GKHRAQNSLMCC-------SDDNDHEQPVVTSPR-- 288

Query: 185 LRVRGRQATKDLLMQMMHERYRELGKLAERRAVSLFPQRGRIQ 313
             +RGRQA  +LL QM H+R RELG++A+ +AVS FP RGRIQ
Sbjct: 289 --LRGRQAYINLLTQMEHDRQRELGRVADCQAVSRFPHRGRIQ 329


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