BLASTX nr result

ID: Cimicifuga21_contig00036928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036928
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002954673.1| kelch repeat protein [Volvox carteri f. naga...    59   4e-07
ref|XP_002591868.1| hypothetical protein BRAFLDRAFT_89382 [Branc...    59   5e-07
gb|EKC28086.1| Kelch-like protein 9 [Crassostrea gigas] gi|40596...    57   2e-06
ref|XP_002598584.1| hypothetical protein BRAFLDRAFT_66975 [Branc...    55   6e-06

>ref|XP_002954673.1| kelch repeat protein [Volvox carteri f. nagariensis]
           gi|300260092|gb|EFJ44314.1| kelch repeat protein [Volvox
           carteri f. nagariensis]
          Length = 355

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
 Frame = +3

Query: 156 VEHYATAVSGNVIYFLGGRQNHCFPGDFTKDSVYAYDTTLESWSTSQLKPMLSP-RYHHT 332
           V H A A+ GN +Y  GGR      G+   + +YA+D    +WS  Q K  L P R +HT
Sbjct: 69  VAHSAAAI-GNTLYIFGGRSGLDM-GEGASNDLYAFDLETSTWSQLQPKGDLPPKRSYHT 126

Query: 333 AVAARNNIYVFGGKYHHYSWGDC--YDIQNDSWGSLPPPPQE 452
             A    +YVFGG        D   YD+  ++W  L  PP E
Sbjct: 127 MTAVGTKLYVFGGCGEEGRLNDLHEYDVTTETWRPLAKPPAE 168


>ref|XP_002591868.1| hypothetical protein BRAFLDRAFT_89382 [Branchiostoma floridae]
           gi|229277080|gb|EEN47879.1| hypothetical protein
           BRAFLDRAFT_89382 [Branchiostoma floridae]
          Length = 652

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
 Frame = +3

Query: 135 VPSDLKEVEHYATAVSGNVIYFLGGRQNHCFPGDFTKDS--VYAYDTTLESWSTSQLKPM 308
           +P +L+  EH+  A +G  IY  GGR  +      +K S  V+ +DT  +SW  S+L P+
Sbjct: 367 LPDELRTTEHFEIAGTGGCIYIAGGRSFNSQMVTESKPSGRVFCFDTKTDSW--SELAPL 424

Query: 309 LSPRYHHTAVAARNNIYVFGG----------KYHHYSWGDCYDIQNDSWGSLPPPPQEV 455
           L PRY+    A   ++Y  GG          +    +  +CY+I+ ++W    P P  V
Sbjct: 425 LMPRYNFALTAFDGHLYAIGGFTADSGGLVCQRPKVNCVECYNIETNTWEFACPLPTGV 483


>gb|EKC28086.1| Kelch-like protein 9 [Crassostrea gigas]
           gi|405967654|gb|EKC32790.1| Kelch-like protein 9
           [Crassostrea gigas]
          Length = 596

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
 Frame = +3

Query: 126 KEEVPSDLKEVEHYATAVSGNVIYFLGGRQNHCFPGDFTKDSVYAYDTTLESWSTSQLKP 305
           + E+ S    + H    V  N +Y LGG    C  G+   +SV  YD   +SW   Q+ P
Sbjct: 320 RSEIASLPSALSHMQVVVYNNFLYVLGGCTTQCAHGESAVNSVMRYDPRFDSW--FQVSP 377

Query: 306 MLSPRYHHTAVAARNNIYVFGGKYHHYS--WGDCYDIQNDSWGSLPPPP 446
           ML  R +  A A  N IY  GGK+   S    + Y+  +++W  +   P
Sbjct: 378 MLHKRAYFFAGALNNRIYAVGGKFKDGSLATAEAYNPADNTWELIASMP 426


>ref|XP_002598584.1| hypothetical protein BRAFLDRAFT_66975 [Branchiostoma floridae]
           gi|229283857|gb|EEN54596.1| hypothetical protein
           BRAFLDRAFT_66975 [Branchiostoma floridae]
          Length = 610

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = +3

Query: 165 YATAVSGNVIYFLGGRQNHCFPGDFTKDSVYAYDTTLESWSTSQLKPMLSPRYHHTAVAA 344
           +A    G  +Y  GG       G    D +  +D T +  +T  LKPM +PR+ H+ V+ 
Sbjct: 445 HAAESHGGKLYIAGGIFVED-AGSTACDDLLRFDPTTKELAT--LKPMGTPRFGHSVVSH 501

Query: 345 RNNIYVFGGKYHH--YSWG-----DCYDIQNDSWGSLPPPP 446
              +Y FGG  +H   +WG     +CYDI++D+W +LP  P
Sbjct: 502 GCKLYSFGGTTYHPEVAWGFAESSECYDIKDDTWTTLPSMP 542