BLASTX nr result
ID: Cimicifuga21_contig00036910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00036910
(293 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
emb|CBI28421.3| unnamed protein product [Vitis vinifera] 119 3e-25
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera] 119 3e-25
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi... 113 1e-23
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi... 113 1e-23
>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 119 bits (298), Expect = 3e-25
Identities = 53/74 (71%), Positives = 62/74 (83%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNEI+KG CL G +EKAMVLF KMLK P PT++TYNTL++GY +GN+NNA RL+DLMK
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Query: 182 ENGCEPDNWTYTEL 223
ENGCEPD WTY EL
Sbjct: 471 ENGCEPDEWTYNEL 484
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
Y ++ G+C ++ A +F++M+K P +TY+TL++G C +G ++ A+ +++ M
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295
Query: 182 ENGCEPDNWTYT-ELTLLAKARYE 250
E G EP +TYT +T L +E
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHE 319
Score = 56.2 bits (134), Expect = 3e-06
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNE++ G+ GK+E A F +M++ P ++Y L+DG+ K G ++ A+ L+ M+
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 182 ENGCEPDNWTY 214
E GC P+ +Y
Sbjct: 541 EMGCNPNVESY 551
>emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 119 bits (298), Expect = 3e-25
Identities = 53/74 (71%), Positives = 62/74 (83%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNEI+KG CL G +EKAMVLF KMLK P PT++TYNTL++GY +GN+NNA RL+DLMK
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Query: 182 ENGCEPDNWTYTEL 223
ENGCEPD WTY EL
Sbjct: 471 ENGCEPDEWTYNEL 484
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
Y ++ G+C ++ A +F++M+K P +TY+TL++G C +G ++ A+ +++ M
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295
Query: 182 ENGCEPDNWTYT-ELTLLAKARYE 250
E G EP +TYT +T L +E
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHE 319
Score = 56.2 bits (134), Expect = 3e-06
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNE++ G+ GK+E A F +M++ P ++Y L+DG+ K G ++ A+ L+ M+
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 182 ENGCEPDNWTY 214
E GC P+ +Y
Sbjct: 541 EMGCNPNVESY 551
Score = 54.7 bits (130), Expect = 8e-06
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
Y+ ++ G C EGK ++A +L +M + P +T+ +L+DG+ G +++A L+ M
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680
Query: 182 ENGCEPDNWTYTEL 223
+ GC+P+ TY+ L
Sbjct: 681 DMGCKPNYRTYSVL 694
>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 119 bits (298), Expect = 3e-25
Identities = 53/74 (71%), Positives = 62/74 (83%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNEI+KG CL G +EKAMVLF KMLK P PT++TYNTL++GY +GN+NNA RL+DLMK
Sbjct: 453 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512
Query: 182 ENGCEPDNWTYTEL 223
ENGCEPD WTY EL
Sbjct: 513 ENGCEPDEWTYNEL 526
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
Y ++ G+C ++ A +F++M+K P +TY+TL++G C +G ++ A+ +++ M
Sbjct: 278 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 337
Query: 182 ENGCEPDNWTYT-ELTLLAKARYE 250
E G EP +TYT +T L +E
Sbjct: 338 EKGIEPTVYTYTLPITALCAIEHE 361
Score = 59.3 bits (142), Expect = 3e-07
Identities = 26/71 (36%), Positives = 45/71 (63%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNE++ G+ GK+E A F +M++ P ++Y TL+DG+ K G ++ A+ L++ M+
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582
Query: 182 ENGCEPDNWTY 214
E GC P+ +Y
Sbjct: 583 EMGCNPNVESY 593
>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 113 bits (283), Expect = 1e-23
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNEI+K +CL G ++KAMV+F+KMLK P +ITYNTL+ GYCKQGNLNNAMRL+++MK
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 182 ENGCEPDNWTYTEL 223
NG +PD WTYTEL
Sbjct: 475 GNGLKPDAWTYTEL 488
Score = 62.0 bits (149), Expect = 5e-08
Identities = 25/72 (34%), Positives = 44/72 (61%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
Y ++ G+C ++ A +F++M+K P +TY+TL++G C +G L AM +++ M
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 182 ENGCEPDNWTYT 217
+ G EP +TYT
Sbjct: 300 QKGIEPTVYTYT 311
>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 113 bits (283), Expect = 1e-23
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
YNEI+K +CL G ++KAMV+F+KMLK P +ITYNTL+ GYCKQGNLNNAMRL+++MK
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 182 ENGCEPDNWTYTEL 223
NG +PD WTYTEL
Sbjct: 475 GNGLKPDAWTYTEL 488
Score = 62.0 bits (149), Expect = 5e-08
Identities = 25/72 (34%), Positives = 44/72 (61%)
Frame = +2
Query: 2 YNEIMKGYCLEGKVEKAMVLFNKMLKGAPPPTLITYNTLVDGYCKQGNLNNAMRLVDLMK 181
Y ++ G+C ++ A +F++M+K P +TY+TL++G C +G L AM +++ M
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 182 ENGCEPDNWTYT 217
+ G EP +TYT
Sbjct: 300 QKGIEPTVYTYT 311