BLASTX nr result
ID: Cimicifuga21_contig00036833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00036833
(466 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17926.3| unnamed protein product [Vitis vinifera] 231 6e-59
emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera] 227 9e-58
ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containi... 197 1e-48
ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group] g... 194 6e-48
gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indi... 192 2e-47
>emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 231 bits (588), Expect = 6e-59
Identities = 108/155 (69%), Positives = 127/155 (81%)
Frame = -2
Query: 465 MEMVGMKLNKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGS 286
ME G+ N LT+LS LSACAS GALDTG WIHAY++KN +N DGSLD SLIDMYSKCG
Sbjct: 315 MEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGD 374
Query: 285 IDKAVQVFEKVPRRDVFSWTSIICGLAMHGHGKQAIHQFSKMQEAGVQPDDVAFVGVLSA 106
IDKAVQ+FE+ RRD+F+WTSI+CGLAMHG G++A+H FSKM+EA VQPDDV VGVLSA
Sbjct: 375 IDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSA 434
Query: 105 CAHAGLVAQGKLYLDLMSQVYRLTPKVEHFGCMID 1
CAHAGL+ QG Y M +V+ L PKVEH+GCM+D
Sbjct: 435 CAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVD 469
Score = 82.0 bits (201), Expect = 5e-14
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 31/161 (19%)
Frame = -2
Query: 465 MEMVGMKLNKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGS 286
M VG+ + + I +++SAC LG L +H +IEK+ + D + +LI Y +CGS
Sbjct: 183 MREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGS 242
Query: 285 IDKAV-------------------------------QVFEKVPRRDVFSWTSIICGLAMH 199
+D A Q+F+ +P RDV SW S+I G A
Sbjct: 243 LDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARI 302
Query: 198 GHGKQAIHQFSKMQEAGVQPDDVAFVGVLSACAHAGLVAQG 76
G ++A+ F +M+ +GV P+ + + LSACA G + G
Sbjct: 303 GQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG 343
Score = 58.5 bits (140), Expect = 5e-07
Identities = 35/121 (28%), Positives = 58/121 (47%)
Frame = -2
Query: 453 GMKLNKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGSIDKA 274
G++ N T + +L A S + G +HA + + + +L+ Y CG + K
Sbjct: 86 GLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKG 145
Query: 273 VQVFEKVPRRDVFSWTSIICGLAMHGHGKQAIHQFSKMQEAGVQPDDVAFVGVLSACAHA 94
QVF+++ + + WT II ++A+ F M+E G+ PD VA V+SAC
Sbjct: 146 RQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLL 205
Query: 93 G 91
G
Sbjct: 206 G 206
>emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 227 bits (578), Expect = 9e-58
Identities = 107/155 (69%), Positives = 126/155 (81%)
Frame = -2
Query: 465 MEMVGMKLNKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGS 286
ME G+ N LT+LS LSACAS GALDTG WIHAY++KN +N DGSLD SLIDMYSKCG
Sbjct: 315 MEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGD 374
Query: 285 IDKAVQVFEKVPRRDVFSWTSIICGLAMHGHGKQAIHQFSKMQEAGVQPDDVAFVGVLSA 106
IDKAVQ+FE+ RRD+F+WTSI+CGLAMHG G++A+H FSKM+EA VQPDDV VGVLSA
Sbjct: 375 IDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSA 434
Query: 105 CAHAGLVAQGKLYLDLMSQVYRLTPKVEHFGCMID 1
CAHAGL+ QG Y M +V+ L PKVEH+G M+D
Sbjct: 435 CAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVD 469
Score = 81.6 bits (200), Expect = 6e-14
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 31/161 (19%)
Frame = -2
Query: 465 MEMVGMKLNKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGS 286
M VG+ + + + +++SAC LG L +H +IEK+ + D + +LI Y +CGS
Sbjct: 183 MREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGS 242
Query: 285 IDKAV-------------------------------QVFEKVPRRDVFSWTSIICGLAMH 199
+D A Q+F+ +P RDV SW S+I G A
Sbjct: 243 LDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARI 302
Query: 198 GHGKQAIHQFSKMQEAGVQPDDVAFVGVLSACAHAGLVAQG 76
G ++A+ F +M+ +GV P+ + + LSACA G + G
Sbjct: 303 GQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG 343
Score = 58.2 bits (139), Expect = 7e-07
Identities = 35/121 (28%), Positives = 58/121 (47%)
Frame = -2
Query: 453 GMKLNKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGSIDKA 274
G++ N T + +L A S + G +HA + + + +L+ Y CG + K
Sbjct: 86 GLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKG 145
Query: 273 VQVFEKVPRRDVFSWTSIICGLAMHGHGKQAIHQFSKMQEAGVQPDDVAFVGVLSACAHA 94
QVF+++ + + WT II ++A+ F M+E G+ PD VA V+SAC
Sbjct: 146 RQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLL 205
Query: 93 G 91
G
Sbjct: 206 G 206
>ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 197 bits (500), Expect = 1e-48
Identities = 88/148 (59%), Positives = 116/148 (78%), Gaps = 1/148 (0%)
Frame = -2
Query: 441 NKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGSIDKAVQVF 262
N T+ ++LSACA G L+TG W+H YI+KN++N +G+LD LIDMY+KCGSIDKA+QVF
Sbjct: 250 NGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVF 309
Query: 261 EKVP-RRDVFSWTSIICGLAMHGHGKQAIHQFSKMQEAGVQPDDVAFVGVLSACAHAGLV 85
EK P +RD++SWT++ICGLAMHG + FS MQ++G+ PDDV FVGVL+ACAH GLV
Sbjct: 310 EKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLV 369
Query: 84 AQGKLYLDLMSQVYRLTPKVEHFGCMID 1
+G + M + YR+TPK+EH+GCMID
Sbjct: 370 DEGLHHFYSMQEKYRITPKIEHYGCMID 397
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Frame = -2
Query: 318 SLIDMYSKCGSIDKAVQVFEKVPRRDVFSWTSIICGLAMHGHGKQAIHQFSKM---QEAG 148
+++ Y + I+ A ++F +PRRDV SW ++I G + G K+A+ F +M
Sbjct: 187 TMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCT 246
Query: 147 VQPDDVAFVGVLSACAHAGLVAQG---KLYLD 61
V P+ VLSACA AG + G LY+D
Sbjct: 247 VHPNGPTMSTVLSACAGAGCLETGIWVHLYID 278
>ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza
sativa Japonica Group] gi|113563600|dbj|BAF13943.1|
Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein
OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 531
Score = 194 bits (493), Expect = 6e-48
Identities = 90/148 (60%), Positives = 110/148 (74%), Gaps = 1/148 (0%)
Frame = -2
Query: 441 NKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGSIDKAVQVF 262
N T+ +IL ACA G L+TG W+HAYIE+N++N DG LD LIDMY KCGSID A+QVF
Sbjct: 250 NVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVF 309
Query: 261 EKVPR-RDVFSWTSIICGLAMHGHGKQAIHQFSKMQEAGVQPDDVAFVGVLSACAHAGLV 85
EK PR RD+FSWT++ICGLAMHG A+ F MQ+ G+ PDDV VGVL+ACAH GLV
Sbjct: 310 EKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLV 369
Query: 84 AQGKLYLDLMSQVYRLTPKVEHFGCMID 1
+G Y M +R+TPK+EH+GCMID
Sbjct: 370 DEGLGYFYSMEAKFRITPKIEHYGCMID 397
>gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 192 bits (488), Expect = 2e-47
Identities = 89/148 (60%), Positives = 110/148 (74%), Gaps = 1/148 (0%)
Frame = -2
Query: 441 NKLTILSILSACASLGALDTGTWIHAYIEKNKLNSDGSLDPSLIDMYSKCGSIDKAVQVF 262
N T+ +IL ACA G L+TG W+HAYIE+N++N DG LD LIDMY KCGSID A+QVF
Sbjct: 249 NVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVF 308
Query: 261 EKVPRR-DVFSWTSIICGLAMHGHGKQAIHQFSKMQEAGVQPDDVAFVGVLSACAHAGLV 85
EK PR+ D+FSWT++ICGLAMHG A+ F MQ+ G+ PDDV VGVL+ACAH GLV
Sbjct: 309 EKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLV 368
Query: 84 AQGKLYLDLMSQVYRLTPKVEHFGCMID 1
+G Y M +R+TPK+EH+GCMID
Sbjct: 369 DEGLGYFYSMEAKFRITPKIEHYGCMID 396
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = -2
Query: 318 SLIDMYSKCGSIDKAVQVFEKVPRRDVFSWTSIICGLAMHGHGKQAIHQFSKM---QEAG 148
+++ Y++ G +D A ++F +PRRDV SW +++ G + G ++A+ F +M
Sbjct: 186 AMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCA 245
Query: 147 VQPDDVAFVGVLSACAHAGLVAQG 76
V P+ +L ACA AG + G
Sbjct: 246 VHPNVPTMSTILGACAGAGCLETG 269