BLASTX nr result
ID: Cimicifuga21_contig00036831
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00036831 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271985.2| PREDICTED: uncharacterized protein LOC100243... 58 7e-07 ref|XP_002335870.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 >ref|XP_002271985.2| PREDICTED: uncharacterized protein LOC100243092 [Vitis vinifera] Length = 301 Score = 58.2 bits (139), Expect = 7e-07 Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 16/116 (13%) Frame = +2 Query: 2 RDCESSGSEHSPDD----LSDLIDSFMXXXXXXXXXXXXXXXVRE-----------ADGL 136 R C+SSGS+HS +D LSDL+DSF+ + E +D L Sbjct: 19 RLCDSSGSDHSEEDDSEELSDLVDSFLERDVIELQVGDEDGKMEEERSDFDSENRWSDSL 78 Query: 137 ETKEMLQSLLLGCVLNGV-EEEVRRTIRDETELACRVIGXXXXXXXQEGFKRRLMS 301 T+EMLQSL+ G N +++V+R IRDE E+ CR + EGFKRRLM+ Sbjct: 79 -TREMLQSLISGDDGNDDGDDDVKRKIRDELEVKCRSL----ENCQAEGFKRRLMT 129 >ref|XP_002335870.1| predicted protein [Populus trichocarpa] gi|222835928|gb|EEE74349.1| predicted protein [Populus trichocarpa] Length = 233 Score = 57.8 bits (138), Expect = 9e-07 Identities = 45/107 (42%), Positives = 56/107 (52%), Gaps = 7/107 (6%) Frame = +2 Query: 2 RDCESSGSEH-SPD----DLSDLIDSFMXXXXXXXXXXXXXXXVREADGLETKEMLQSLL 166 R CESSGSEH SPD DLSDL++SF+ E TK+ L++LL Sbjct: 24 RLCESSGSEHYSPDNNSADLSDLVNSFIERDIDQHDESLDICSYSE-----TKDTLENLL 78 Query: 167 LGCVLNGVEEE--VRRTIRDETELACRVIGXXXXXXXQEGFKRRLMS 301 N +E++ VR+ IR ETELAC +IG FKR LMS Sbjct: 79 -----NSIEDDDDVRQKIRKETELACGIIGERSSLSSHLDFKRGLMS 120