BLASTX nr result

ID: Cimicifuga21_contig00036828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036828
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181142.1| late embryogenesis abundant hydroxyproline-rich...   119   3e-25
ref|XP_002322795.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002879585.1| yellow-leaf-specific gene 9 [Arabidopsis lyr...   117   1e-24
emb|CAA68848.1| hin1 [Nicotiana tabacum]                              115   3e-24
gb|AAF62403.1|AF212183_1 harpin inducing protein [Nicotiana taba...   115   3e-24

>ref|NP_181142.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana] gi|4510371|gb|AAD21459.1| similar
           to harpin-induced protein hin1 from tobacco [Arabidopsis
           thaliana] gi|13122296|dbj|BAB32889.1| hin1 homolog
           [Arabidopsis thaliana] gi|21554788|gb|AAM63691.1|
           similar to harpin-induced protein hin1 from tobacco
           [Arabidopsis thaliana] gi|27754489|gb|AAO22692.1|
           putative harpin-induced protein hin1 [Arabidopsis
           thaliana] gi|28393973|gb|AAO42394.1| putative
           harpin-induced protein hin1 [Arabidopsis thaliana]
           gi|330254091|gb|AEC09185.1| late embryogenesis abundant
           hydroxyproline-rich glycoprotein [Arabidopsis thaliana]
          Length = 227

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   ALILWLVYRPVNIKAHVVDASLTEFNLTT-NNHIRYNLALDISVRNPNKRIGFYYDRLEA 179
           ALI WL+ RP  IK HV DASLT F+ T+ +N +RYNLAL + VRNPNKRIG YYDR+EA
Sbjct: 56  ALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEA 115

Query: 180 KAYYEGDWFATSTTALSDFYQGHKNTTMLRPVF 278
            AYYEG  F+T T  L+ FYQGHKNTT+L P F
Sbjct: 116 HAYYEGKRFSTIT--LTPFYQGHKNTTVLTPTF 146


>ref|XP_002322795.1| predicted protein [Populus trichocarpa] gi|222867425|gb|EEF04556.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/93 (61%), Positives = 75/93 (80%), Gaps = 2/93 (2%)
 Frame = +3

Query: 6   LILWLVYRPVN-IKAHVVDASLTEFNLTTNNH-IRYNLALDISVRNPNKRIGFYYDRLEA 179
           LI+WL++RP+N +K HV D +LTEFN +TNN  +RYNLA ++S+RNPNK+IG YY+R+EA
Sbjct: 56  LIVWLIFRPINKVKFHVTDVALTEFNYSTNNTMLRYNLAFNVSIRNPNKKIGIYYNRVEA 115

Query: 180 KAYYEGDWFATSTTALSDFYQGHKNTTMLRPVF 278
           KA+YEG  F  S  +L+ FYQGHKNTT+L  VF
Sbjct: 116 KAFYEGQRFGYS--SLTPFYQGHKNTTVLNVVF 146


>ref|XP_002879585.1| yellow-leaf-specific gene 9 [Arabidopsis lyrata subsp. lyrata]
           gi|297325424|gb|EFH55844.1| yellow-leaf-specific gene 9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/93 (64%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   ALILWLVYRPVNIKAHVVDASLTEFNLTT-NNHIRYNLALDISVRNPNKRIGFYYDRLEA 179
           ALI WL+ RP  IK HV DASLT F+ T+ +N +RYNLAL + VRNPNKRIG YYDR+EA
Sbjct: 56  ALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGVYYDRIEA 115

Query: 180 KAYYEGDWFATSTTALSDFYQGHKNTTMLRPVF 278
            AYYEG  F  S+ +L+ FYQGHKNTT+L P F
Sbjct: 116 HAYYEGKRF--SSISLTPFYQGHKNTTVLTPTF 146


>emb|CAA68848.1| hin1 [Nicotiana tabacum]
          Length = 221

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/93 (61%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   ALILWLVYRPVNIKAHVVDASLTEFNL-TTNNHIRYNLALDISVRNPNKRIGFYYDRLEA 179
           AL+LWLV RP  +K +V DA+LT+F+L TTNN I Y+LAL++++RNPNKRIG YYD +EA
Sbjct: 52  ALVLWLVLRPNKVKFYVTDATLTQFDLSTTNNTIFYDLALNMTIRNPNKRIGIYYDSIEA 111

Query: 180 KAYYEGDWFATSTTALSDFYQGHKNTTMLRPVF 278
           +A Y+G+ F   +T L  FYQGHKNT+ LRPVF
Sbjct: 112 RALYQGERF--DSTNLEPFYQGHKNTSSLRPVF 142


>gb|AAF62403.1|AF212183_1 harpin inducing protein [Nicotiana tabacum]
           gi|22830759|dbj|BAC15623.1| hin1 [Nicotiana tabacum]
          Length = 229

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/93 (61%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   ALILWLVYRPVNIKAHVVDASLTEFNL-TTNNHIRYNLALDISVRNPNKRIGFYYDRLEA 179
           AL+LWLV RP  +K +V DA+LT+F+L TTNN I Y+LAL++++RNPNKRIG YYD +EA
Sbjct: 60  ALVLWLVLRPNKVKFYVTDATLTQFDLSTTNNTIFYDLALNMTIRNPNKRIGIYYDSIEA 119

Query: 180 KAYYEGDWFATSTTALSDFYQGHKNTTMLRPVF 278
           +A Y+G+ F   +T L  FYQGHKNT+ LRPVF
Sbjct: 120 RALYQGERF--DSTNLEPFYQGHKNTSSLRPVF 150


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