BLASTX nr result
ID: Cimicifuga21_contig00036821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00036821 (355 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257... 129 2e-28 ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2... 124 8e-27 ref|XP_002891556.1| hypothetical protein ARALYDRAFT_891939 [Arab... 114 6e-24 ref|NP_175432.2| uncharacterized protein [Arabidopsis thaliana] ... 114 6e-24 ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like... 113 2e-23 >ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera] gi|297737934|emb|CBI27135.3| unnamed protein product [Vitis vinifera] Length = 552 Score = 129 bits (325), Expect = 2e-28 Identities = 62/99 (62%), Positives = 76/99 (76%), Gaps = 3/99 (3%) Frame = -1 Query: 289 LVPSLKLQTDKDIYRPGDSVAVTITVHNPG---KETNKHETDNDAKWSLLLEKLSFEIKG 119 LVPSLKL+TDKD+YRPG+S+ V+I +HNP E +K E D LL+E LSFEIKG Sbjct: 32 LVPSLKLRTDKDVYRPGESIVVSIEIHNPSGVVDELSKKENAGDVLCPLLVEMLSFEIKG 91 Query: 118 YEKLDTQWFATKKQLSGPRHRRGEHVFLDCSTPSIISNQ 2 EKLD+QW+AT+K L G + RRGEH FLDC+TPSI+SNQ Sbjct: 92 IEKLDSQWYATQKPLPGSKQRRGEHTFLDCATPSIVSNQ 130 >ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1| predicted protein [Populus trichocarpa] Length = 533 Score = 124 bits (311), Expect = 8e-27 Identities = 62/106 (58%), Positives = 77/106 (72%) Frame = -1 Query: 319 SEEPKKDQLRLVPSLKLQTDKDIYRPGDSVAVTITVHNPGKETNKHETDNDAKWSLLLEK 140 S + +KD+L VP+LK+QTDKD+YRPGDS+ VTI + NP K D SLL+EK Sbjct: 16 SSDGRKDEL--VPTLKVQTDKDVYRPGDSILVTIEISNP-----KDGASEDVMSSLLIEK 68 Query: 139 LSFEIKGYEKLDTQWFATKKQLSGPRHRRGEHVFLDCSTPSIISNQ 2 L F I+G +KLD QWFAT+K L G + RRGEHVF+DCST SI+SNQ Sbjct: 69 LGFAIRGIQKLDNQWFATQKPLPGSKQRRGEHVFMDCSTSSIVSNQ 114 >ref|XP_002891556.1| hypothetical protein ARALYDRAFT_891939 [Arabidopsis lyrata subsp. lyrata] gi|297337398|gb|EFH67815.1| hypothetical protein ARALYDRAFT_891939 [Arabidopsis lyrata subsp. lyrata] Length = 527 Score = 114 bits (286), Expect = 6e-24 Identities = 58/97 (59%), Positives = 73/97 (75%) Frame = -1 Query: 292 RLVPSLKLQTDKDIYRPGDSVAVTITVHNPGKETNKHETDNDAKWSLLLEKLSFEIKGYE 113 ++ PSL +QTDKD+YRPGDS+ VTI V N HE N++ S+L+EKLSFE+KG E Sbjct: 22 KIKPSLTVQTDKDVYRPGDSIFVTIEVGN------SHE--NESNPSILVEKLSFEVKGLE 73 Query: 112 KLDTQWFATKKQLSGPRHRRGEHVFLDCSTPSIISNQ 2 KLD QWF+T+K G + RRGEH+FLD STPS+ISNQ Sbjct: 74 KLDIQWFSTQKPSPGSKGRRGEHIFLDSSTPSLISNQ 110 >ref|NP_175432.2| uncharacterized protein [Arabidopsis thaliana] gi|20268711|gb|AAM14059.1| unknown protein [Arabidopsis thaliana] gi|21689887|gb|AAM67504.1| unknown protein [Arabidopsis thaliana] gi|332194396|gb|AEE32517.1| uncharacterized protein [Arabidopsis thaliana] Length = 532 Score = 114 bits (286), Expect = 6e-24 Identities = 58/97 (59%), Positives = 72/97 (74%) Frame = -1 Query: 292 RLVPSLKLQTDKDIYRPGDSVAVTITVHNPGKETNKHETDNDAKWSLLLEKLSFEIKGYE 113 ++ PSL +QTDKD+YRPGDS+ VTI V N H DN + S+L+EKLSFE+KG E Sbjct: 27 KIKPSLSVQTDKDVYRPGDSIFVTIEV------ANSH--DNASNPSILVEKLSFEVKGLE 78 Query: 112 KLDTQWFATKKQLSGPRHRRGEHVFLDCSTPSIISNQ 2 KLD QWF+T+K G + RRGEH+FLD STPS+ISNQ Sbjct: 79 KLDIQWFSTQKPSPGSKGRRGEHIFLDSSTPSLISNQ 115 >ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] Length = 529 Score = 113 bits (282), Expect = 2e-23 Identities = 54/96 (56%), Positives = 69/96 (71%) Frame = -1 Query: 289 LVPSLKLQTDKDIYRPGDSVAVTITVHNPGKETNKHETDNDAKWSLLLEKLSFEIKGYEK 110 +VP+LKL+TDK +YRPGD V +TI + NP +S L+E+LSFEI+G EK Sbjct: 27 IVPTLKLETDKQVYRPGDPVIITIQISNPSNG-----------YSFLMERLSFEIRGIEK 75 Query: 109 LDTQWFATKKQLSGPRHRRGEHVFLDCSTPSIISNQ 2 LDTQWFAT+K L G R RRGEHVF+D STP +++NQ Sbjct: 76 LDTQWFATQKPLPGSRQRRGEHVFVDSSTPILVANQ 111