BLASTX nr result

ID: Cimicifuga21_contig00036820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036820
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814...   107   1e-21
ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791...   106   2e-21
gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]   102   4e-20
ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19

>ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max]
          Length = 1237

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 6/82 (7%)
 Frame = -3

Query: 229 NGYRKKSHTVVQSWDGTTTSFN---GDEA--EHFELSKRQGCGIPCYWSKRTPKHRS-CR 68
           N Y  +  + + SWDGTTTS N   GD+   +H +L  RQGCGIPCYWSKRTPKHR  C 
Sbjct: 271 NRYGHRYPSTLGSWDGTTTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHRGMCG 330

Query: 67  GCYSPSLSDTLRRKGSRILCGS 2
            CYSPSLSDTLRRKGS +LCGS
Sbjct: 331 SCYSPSLSDTLRRKGSSMLCGS 352


>ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max]
          Length = 1236

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 6/82 (7%)
 Frame = -3

Query: 229 NGYRKKSHTVVQSWDGTTTSFN---GDEA--EHFELSKRQGCGIPCYWSKRTPKH-RSCR 68
           N Y  +  + + SWDGTTTS N   GD+   +H +L  RQGCGIPCYWSKRTPKH R C 
Sbjct: 268 NRYGHRYPSTLGSWDGTTTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHRRMCG 327

Query: 67  GCYSPSLSDTLRRKGSRILCGS 2
            CYSPSLSDTLRRKGS +LCGS
Sbjct: 328 SCYSPSLSDTLRRKGSSMLCGS 349


>gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]
          Length = 1223

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/80 (63%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
 Frame = -3

Query: 229 NGYRKKSHTVVQSWDGTTTSFNG---DEAEHFELSKRQGCGIPCYWSKRTPKHRS-CRGC 62
           N Y   + +VV SWD TTTS N    D  +  +L  +QGCGIPCYW+KRTPKHR  C  C
Sbjct: 280 NKYFNHNPSVVGSWDATTTSLNDGDDDVDDPLDLPGQQGCGIPCYWTKRTPKHRVVCGSC 339

Query: 61  YSPSLSDTLRRKGSRILCGS 2
           YSPSLSDTLRRKGS ILCGS
Sbjct: 340 YSPSLSDTLRRKGSSILCGS 359


>ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|222840649|gb|EEE78196.1|
           predicted protein [Populus trichocarpa]
          Length = 1241

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/81 (59%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
 Frame = -3

Query: 229 NGYRKKSHTVVQSWDGTTTSFNG---DEAEHFELSKRQGCGIPCYWSKRTPKHRSCRG-- 65
           N YR ++ + V SWD TTTS N    ++ +H +L  R GCGIPCYWSKRTP++R   G  
Sbjct: 288 NKYRNRNPSTVGSWDATTTSMNDGDDEDGDHLDLPGRHGCGIPCYWSKRTPRYRGVCGSS 347

Query: 64  CYSPSLSDTLRRKGSRILCGS 2
           C SPSLSDTLRRKGS +LCGS
Sbjct: 348 CCSPSLSDTLRRKGSSMLCGS 368


>ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|222839109|gb|EEE77460.1|
           predicted protein [Populus trichocarpa]
          Length = 1197

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/79 (63%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
 Frame = -3

Query: 223 YRKKSHTVVQSWDGTTTSFN-GDEAE--HFELSKRQGCGIPCYWSKRTPKHRSCRG--CY 59
           YRK++ + V SWD TTTS N GD+ +  H +L  RQGCGIPCYWSKRTP++R   G  C 
Sbjct: 297 YRKRNPSNVGSWDATTTSVNDGDDEDDDHLDLPGRQGCGIPCYWSKRTPRYRGVCGSSCC 356

Query: 58  SPSLSDTLRRKGSRILCGS 2
           SPSLSDTLRRKGS + CGS
Sbjct: 357 SPSLSDTLRRKGSSMFCGS 375


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