BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036784
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   132   3e-29
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   125   5e-27
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   120   9e-26
emb|CAN76931.1| hypothetical protein VITISV_023947 [Vitis vinifera]    86   4e-15
emb|CAN79905.1| hypothetical protein VITISV_022123 [Vitis vinifera]    85   7e-15

>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/101 (65%), Positives = 77/101 (76%)
 Frame = -2

Query: 304 SRCINMLDQKTFGGNLAIEFDIKKVFDILNWNFLLEVLKKFGFQEKFNGWIMEIL*SEKL 125
           S  INMLDQK+FGGNLA + DI K FD LNW FLL+VLK+FGF E F  WI  IL S KL
Sbjct: 242 SEAINMLDQKSFGGNLAFKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWIDAILQSAKL 301

Query: 124 CILLNRVPQGFLSCSRGVRQGDHLSLILFCLAKEVLSRSIS 2
            I +N   QG+ SCSRGVRQGD LS +LFCLA++VLSRS++
Sbjct: 302 SICINGSQQGYFSCSRGVRQGDPLSPLLFCLAEDVLSRSLT 342


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/101 (60%), Positives = 74/101 (73%)
 Frame = -2

Query: 304 SRCINMLDQKTFGGNLAIEFDIKKVFDILNWNFLLEVLKKFGFQEKFNGWIMEIL*SEKL 125
           S  IN+LD K+FGGNLA++ D+ K FD LNW+FLL VLK FGF E F  WI  IL S K+
Sbjct: 303 SEAINVLDNKSFGGNLALKIDVTKAFDTLNWDFLLLVLKTFGFNELFCNWIKTILHSSKM 362

Query: 124 CILLNRVPQGFLSCSRGVRQGDHLSLILFCLAKEVLSRSIS 2
            I +N    GF +C+RGVRQGD LS +LFC+ +EVLSRSIS
Sbjct: 363 FISMNGAQHGFFNCNRGVRQGDPLSPLLFCIVEEVLSRSIS 403


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/101 (56%), Positives = 77/101 (76%)
 Frame = -2

Query: 304 SRCINMLDQKTFGGNLAIEFDIKKVFDILNWNFLLEVLKKFGFQEKFNGWIMEIL*SEKL 125
           S  IN+L+++ +GGN+A++ DI K FD L+WNFLL VL++FGF EKF  WI+ IL S +L
Sbjct: 568 SEAINLLEKRQYGGNVALKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWILVILQSARL 627

Query: 124 CILLNRVPQGFLSCSRGVRQGDHLSLILFCLAKEVLSRSIS 2
            +L+N    GF +CS GVRQGD LS +LFCL +EVLSR++S
Sbjct: 628 SVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALS 668


>emb|CAN76931.1| hypothetical protein VITISV_023947 [Vitis vinifera]
          Length = 916

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = -2

Query: 280 QKTFGGNLAIEFDIKKVFDILNWNFLLEVLKKFGFQEKFNGWIMEIL*SEKLCILLNRVP 101
           QK     L  + DI+K +D +NWNFL++VLKK GF  ++  W+   L + K  +L+N VP
Sbjct: 405 QKRKEKRLVCKLDIEKAYDSINWNFLMKVLKKMGFGSRWMEWMWWCLSTAKFSVLINGVP 464

Query: 100 QGFLSCSRGVRQGDHLSLILFCLAKEVLSRSI 5
           +GF S S+G+RQGD +S  LF L  EVLS  I
Sbjct: 465 KGFFSSSKGLRQGDPISPYLFVLGMEVLSALI 496


>emb|CAN79905.1| hypothetical protein VITISV_022123 [Vitis vinifera]
          Length = 1420

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/92 (45%), Positives = 59/92 (64%)
 Frame = -2

Query: 280  QKTFGGNLAIEFDIKKVFDILNWNFLLEVLKKFGFQEKFNGWIMEIL*SEKLCILLNRVP 101
            QK     L  + DI+K +D ++WNFL++VLKK GF  ++  W+     + K  +L+N VP
Sbjct: 1254 QKRKEKGLVCKLDIEKAYDSISWNFLMKVLKKMGFGSRWMEWMWWCFSTAKFSVLINGVP 1313

Query: 100  QGFLSCSRGVRQGDHLSLILFCLAKEVLSRSI 5
            +GF S S+G+RQGD +S  LF L KEVLS  I
Sbjct: 1314 EGFFSSSKGLRQGDPISPYLFILGKEVLSALI 1345