BLASTX nr result

ID: Cimicifuga21_contig00036755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036755
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15512.3| unnamed protein product [Vitis vinifera]              107   1e-21
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]   107   1e-21
ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18

>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/90 (58%), Positives = 70/90 (77%)
 Frame = +2

Query: 5   IALCQENRPHAAKSLLKRMLIDGCETTLEVYNELIQCFCKFDDLNEALLLKDEMLEKGLK 184
           +ALC+ENRP AAK+LL+RM  DG +  LE+YNELI+ FC+ D + EALLLK EM++K +K
Sbjct: 441 VALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIK 500

Query: 185 PDLFTYRVLISCLCRLCRSFDGEFMMREMV 274
           P+L TYR +I CL RL RS +GE ++ EMV
Sbjct: 501 PNLATYRAVIGCLSRLSRSMEGESLVGEMV 530


>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/90 (57%), Positives = 70/90 (77%)
 Frame = +2

Query: 5   IALCQENRPHAAKSLLKRMLIDGCETTLEVYNELIQCFCKFDDLNEALLLKDEMLEKGLK 184
           +ALC+ENRP AAK+LL+RM  DG +  LE+YNELI+ FC+ D + EALLLK EM++K +K
Sbjct: 486 VALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIK 545

Query: 185 PDLFTYRVLISCLCRLCRSFDGEFMMREMV 274
           P+L TYR ++ CL RL RS +GE ++ EMV
Sbjct: 546 PNLATYRAVJGCLSRLSRSMEGESLVGEMV 575


>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/90 (51%), Positives = 67/90 (74%)
 Frame = +2

Query: 5   IALCQENRPHAAKSLLKRMLIDGCETTLEVYNELIQCFCKFDDLNEALLLKDEMLEKGLK 184
           I+LC+E+RP AAKSLL+R+L D  +   ++YN+LI+ FC+ ++++EALLLK EM+ +  K
Sbjct: 443 ISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYK 502

Query: 185 PDLFTYRVLISCLCRLCRSFDGEFMMREMV 274
           P   TY+ LI C+C + RS DGE +M EMV
Sbjct: 503 PTTDTYKSLIHCMCEINRSVDGEGLMVEMV 532


>ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/90 (51%), Positives = 67/90 (74%)
 Frame = +2

Query: 5   IALCQENRPHAAKSLLKRMLIDGCETTLEVYNELIQCFCKFDDLNEALLLKDEMLEKGLK 184
           I+LC+E+RP AAKSLL+R+L D  +   ++YN+LI+ FC+ ++++EALLLK EM+ +  K
Sbjct: 439 ISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYK 498

Query: 185 PDLFTYRVLISCLCRLCRSFDGEFMMREMV 274
           P   TY+ LI C+C + RS DGE +M EMV
Sbjct: 499 PTTDTYKSLIHCMCEINRSVDGEGLMVEMV 528


>ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Brachypodium distachyon]
          Length = 579

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/89 (46%), Positives = 64/89 (71%)
 Frame = +2

Query: 8   ALCQENRPHAAKSLLKRMLIDGCETTLEVYNELIQCFCKFDDLNEALLLKDEMLEKGLKP 187
           ALC++ RPHAA+ L K M+ DG   +LE+YN ++ C C+ D +++AL +K EM  + ++P
Sbjct: 398 ALCEDMRPHAARGLFKWMVEDGHSPSLEMYNMILDCLCQCDSVDDALDVKVEMSSREVRP 457

Query: 188 DLFTYRVLISCLCRLCRSFDGEFMMREMV 274
           D  TY+ L++CLCRL +S DG+ +M EM+
Sbjct: 458 DFHTYQALVTCLCRLGKSLDGKSVMAEMI 486


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