BLASTX nr result

ID: Cimicifuga21_contig00036754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036754
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...   159   3e-37
emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera]   159   3e-37
ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|19...   157   8e-37
ref|NP_001064804.1| Os10g0466300 [Oryza sativa Japonica Group] g...   157   1e-36
ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 7...   157   1e-36

>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
           gi|296083725|emb|CBI23714.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/95 (80%), Positives = 82/95 (86%)
 Frame = +2

Query: 17  DASGAEGYTSAAFHPDGLILGTGTSEGLVKFWDIKSQANFAMFNEHVGPVTATVFSENGY 196
           DASG+EGYTSAAFHPDGLILGTGTSE LVK WD+KSQAN A F+ HVG VTA  FSENGY
Sbjct: 351 DASGSEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGY 410

Query: 197 FMLSAACDGVKLWDLRKLSNFRTFAPYDSDTPTNS 301
           F+ +AA DGVKLWDLRKL NFRTF PYDS+T TNS
Sbjct: 411 FLATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNS 445


>emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera]
          Length = 247

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/95 (80%), Positives = 82/95 (86%)
 Frame = +2

Query: 17  DASGAEGYTSAAFHPDGLILGTGTSEGLVKFWDIKSQANFAMFNEHVGPVTATVFSENGY 196
           DASG+EGYTSAAFHPDGLILGTGTSE LVK WD+KSQAN A F+ HVG VTA  FSENGY
Sbjct: 74  DASGSEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGY 133

Query: 197 FMLSAACDGVKLWDLRKLSNFRTFAPYDSDTPTNS 301
           F+ +AA DGVKLWDLRKL NFRTF PYDS+T TNS
Sbjct: 134 FLATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNS 168


>ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|195640644|gb|ACG39790.1|
           pre-mRNA-splicing factor 19 [Zea mays]
           gi|224030373|gb|ACN34262.1| unknown [Zea mays]
           gi|414871140|tpg|DAA49697.1| TPA: pre-mRNA-splicing
           factor 19 isoform 1 [Zea mays]
           gi|414871141|tpg|DAA49698.1| TPA: pre-mRNA-splicing
           factor 19 isoform 2 [Zea mays]
          Length = 526

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = +2

Query: 17  DASGAEGYTSAAFHPDGLILGTGTSEGLVKFWDIKSQANFAMFNEHVGPVTATVFSENGY 196
           +ASG EGYTSA+FHPDGLILGTGT++ +VK WD+K+Q+N A F  HVGPVTA  FSENGY
Sbjct: 348 EASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGY 407

Query: 197 FMLSAACDGVKLWDLRKLSNFRTFAPYDSDTPTNSGMLSFT 319
           F+ +AA DGVKLWDLRKL NFRTF+PYDSDTPTN+    F+
Sbjct: 408 FLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFS 448


>ref|NP_001064804.1| Os10g0466300 [Oryza sativa Japonica Group]
           gi|75333134|sp|Q9AV81.1|PUB72_ORYSJ RecName: Full=U-box
           domain-containing protein 72; AltName: Full=Plant U-box
           protein 72; Short=OsPUB72
           gi|13489182|gb|AAK27816.1|AC022457_19 putative WD-repeat
           containing protein [Oryza sativa Japonica Group]
           gi|31432577|gb|AAP54192.1| PRP19/PSO4, putative,
           expressed [Oryza sativa Japonica Group]
           gi|110289220|gb|ABG66129.1| PRP19/PSO4, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113639413|dbj|BAF26718.1| Os10g0466300 [Oryza sativa
           Japonica Group] gi|215694001|dbj|BAG89200.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222612972|gb|EEE51104.1| hypothetical protein
           OsJ_31829 [Oryza sativa Japonica Group]
          Length = 527

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/101 (71%), Positives = 84/101 (83%)
 Frame = +2

Query: 17  DASGAEGYTSAAFHPDGLILGTGTSEGLVKFWDIKSQANFAMFNEHVGPVTATVFSENGY 196
           ++SG EGYTSA+FHPDGLILGTGT+E +VK WD+K+Q+N A F  HVGPVTA  FSENGY
Sbjct: 348 ESSGQEGYTSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGY 407

Query: 197 FMLSAACDGVKLWDLRKLSNFRTFAPYDSDTPTNSGMLSFT 319
           F+ +AA DGVKLWDLRKL NFRT +PYDSDTPTNS    F+
Sbjct: 408 FLATAALDGVKLWDLRKLRNFRTISPYDSDTPTNSVEFDFS 448


>ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium
           distachyon]
          Length = 527

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/101 (71%), Positives = 83/101 (82%)
 Frame = +2

Query: 17  DASGAEGYTSAAFHPDGLILGTGTSEGLVKFWDIKSQANFAMFNEHVGPVTATVFSENGY 196
           +ASG EGYTSA+FHPDGLILGTGT++  VK WD+K+Q+N A F  H GPVTA  FSENGY
Sbjct: 348 EASGLEGYTSASFHPDGLILGTGTTDAAVKIWDVKTQSNVAKFEGHAGPVTAMSFSENGY 407

Query: 197 FMLSAACDGVKLWDLRKLSNFRTFAPYDSDTPTNSGMLSFT 319
           F+ +AA DGVKLWDLRKL NFRTF+PYDSDTPTNS    F+
Sbjct: 408 FLATAALDGVKLWDLRKLRNFRTFSPYDSDTPTNSVEFDFS 448