BLASTX nr result

ID: Cimicifuga21_contig00036741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036741
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31619.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP...   159   3e-37
ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   155   3e-36
ref|XP_002316264.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   151   5e-35

>emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/101 (75%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182
           MVSSPHP+PC ES  YGK+R   SA+ RG + +E Q  + PGSY+K IACGGRHSAV+TD
Sbjct: 244 MVSSPHPVPCVESSSYGKERS--SALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITD 301

Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305
           AGALL FGWGLYGQCGQGSTDDELSPTCVSS+LGIQIE VA
Sbjct: 302 AGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVA 342


>ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/101 (75%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182
           MVSSPHP+PC ES  YGK+R   SA+ RG + +E Q  + PGSY+K IACGGRHSAV+TD
Sbjct: 267 MVSSPHPVPCVESSSYGKERS--SALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITD 324

Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305
           AGALL FGWGLYGQCGQGSTDDELSPTCVSS+LGIQIE VA
Sbjct: 325 AGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVA 365


>ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
           gi|449516435|ref|XP_004165252.1| PREDICTED: E3
           ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/101 (74%), Positives = 82/101 (81%)
 Frame = +3

Query: 3   MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182
           MVSSPHPIPC ES  +GKDR   +A+ RG    E Q  + PGSY+K IACGGRHSA VTD
Sbjct: 274 MVSSPHPIPCIESSSFGKDRS--AALARGSASLEGQGSRIPGSYVKGIACGGRHSAAVTD 331

Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305
           AGALLTFGWGLYGQCGQG TDDELSPTCVSS+LGI+IE VA
Sbjct: 332 AGALLTFGWGLYGQCGQGCTDDELSPTCVSSLLGIRIESVA 372


>ref|XP_002316264.1| predicted protein [Populus trichocarpa] gi|222865304|gb|EEF02435.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/101 (74%), Positives = 84/101 (83%)
 Frame = +3

Query: 3   MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182
           MVSSPHPIPC +S  YGKDR     + RG + SE Q  + PGS++K IACGGRHSAV+TD
Sbjct: 33  MVSSPHPIPCIDS-AYGKDR--AVVLSRGGMTSEGQSFRVPGSHVKGIACGGRHSAVITD 89

Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305
           AGALLTFGWGLYGQCGQGSTDDELSPTCVSS+LGI+IE VA
Sbjct: 90  AGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEAVA 130


>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 83/101 (82%)
 Frame = +3

Query: 3   MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182
           MVSSPH +PC  S  YGKD    +++ RG + S+ Q  + PGSYIK IACGGRHSAV+TD
Sbjct: 263 MVSSPHLVPCINSSSYGKDIS--ASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITD 320

Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305
           AGA+LTFGWGLYGQCGQGSTDDELSP CVSS+LGI+IEGVA
Sbjct: 321 AGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVA 361


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