BLASTX nr result
ID: Cimicifuga21_contig00036741
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00036741 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31619.3| unnamed protein product [Vitis vinifera] 159 3e-37 ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP... 159 3e-37 ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 155 3e-36 ref|XP_002316264.1| predicted protein [Populus trichocarpa] gi|2... 153 2e-35 ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig... 151 5e-35 >emb|CBI31619.3| unnamed protein product [Vitis vinifera] Length = 461 Score = 159 bits (401), Expect = 3e-37 Identities = 76/101 (75%), Positives = 85/101 (84%) Frame = +3 Query: 3 MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182 MVSSPHP+PC ES YGK+R SA+ RG + +E Q + PGSY+K IACGGRHSAV+TD Sbjct: 244 MVSSPHPVPCVESSSYGKERS--SALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITD 301 Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305 AGALL FGWGLYGQCGQGSTDDELSPTCVSS+LGIQIE VA Sbjct: 302 AGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVA 342 >ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis vinifera] Length = 484 Score = 159 bits (401), Expect = 3e-37 Identities = 76/101 (75%), Positives = 85/101 (84%) Frame = +3 Query: 3 MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182 MVSSPHP+PC ES YGK+R SA+ RG + +E Q + PGSY+K IACGGRHSAV+TD Sbjct: 267 MVSSPHPVPCVESSSYGKERS--SALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITD 324 Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305 AGALL FGWGLYGQCGQGSTDDELSPTCVSS+LGIQIE VA Sbjct: 325 AGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVA 365 >ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] Length = 491 Score = 155 bits (392), Expect = 3e-36 Identities = 75/101 (74%), Positives = 82/101 (81%) Frame = +3 Query: 3 MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182 MVSSPHPIPC ES +GKDR +A+ RG E Q + PGSY+K IACGGRHSA VTD Sbjct: 274 MVSSPHPIPCIESSSFGKDRS--AALARGSASLEGQGSRIPGSYVKGIACGGRHSAAVTD 331 Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305 AGALLTFGWGLYGQCGQG TDDELSPTCVSS+LGI+IE VA Sbjct: 332 AGALLTFGWGLYGQCGQGCTDDELSPTCVSSLLGIRIESVA 372 >ref|XP_002316264.1| predicted protein [Populus trichocarpa] gi|222865304|gb|EEF02435.1| predicted protein [Populus trichocarpa] Length = 164 Score = 153 bits (386), Expect = 2e-35 Identities = 75/101 (74%), Positives = 84/101 (83%) Frame = +3 Query: 3 MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182 MVSSPHPIPC +S YGKDR + RG + SE Q + PGS++K IACGGRHSAV+TD Sbjct: 33 MVSSPHPIPCIDS-AYGKDR--AVVLSRGGMTSEGQSFRVPGSHVKGIACGGRHSAVITD 89 Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305 AGALLTFGWGLYGQCGQGSTDDELSPTCVSS+LGI+IE VA Sbjct: 90 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEAVA 130 >ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 480 Score = 151 bits (382), Expect = 5e-35 Identities = 72/101 (71%), Positives = 83/101 (82%) Frame = +3 Query: 3 MVSSPHPIPCFESPGYGKDRDRKSAVPRGKLISEEQVCKAPGSYIKSIACGGRHSAVVTD 182 MVSSPH +PC S YGKD +++ RG + S+ Q + PGSYIK IACGGRHSAV+TD Sbjct: 263 MVSSPHLVPCINSSSYGKDIS--ASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITD 320 Query: 183 AGALLTFGWGLYGQCGQGSTDDELSPTCVSSMLGIQIEGVA 305 AGA+LTFGWGLYGQCGQGSTDDELSP CVSS+LGI+IEGVA Sbjct: 321 AGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVA 361