BLASTX nr result

ID: Cimicifuga21_contig00036733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036733
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245...   159   2e-37
gb|AAD55677.1| putative transposase protein [Zea mays]                152   3e-35
emb|CAA40555.1| TNP2 [Antirrhinum majus]                              150   1e-34
emb|CAN82098.1| hypothetical protein VITISV_022259 [Vitis vinifera]   142   4e-32
gb|AAM18727.1|AC092548_5 putative TNP2-like transposon protein [...   132   3e-29

>ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245099 [Vitis vinifera]
          Length = 1264

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/138 (55%), Positives = 92/138 (66%)
 Frame = -1

Query: 415 SGWSTKGKLVCPSCHEQTSSTRLQKGNKFCYMSHRRSLPLDHMYRRNKSSFDNYAEWREA 236
           S WSTKGK  CP C++  SS +LQ G K+CYM HRR LP+DH +R +K SFD   E R A
Sbjct: 343 SCWSTKGKFACPICNKDCSSFQLQNGQKWCYMGHRRFLPIDHRFRCDKKSFDGNEEHRAA 402

Query: 235 PKPLTGHDVCVQLSGYDEIIFGKGEHDTAG*KRK*DDNNLPHNWKKISIFFELPYWKDLC 56
           PK L+G D+  QL G + I  GK   +    KRK +   L HNWKK SIFF+ PYWK L 
Sbjct: 403 PKQLSGEDILHQLDGMEHITLGKTSKNKVSAKRKREHVELEHNWKKKSIFFQFPYWKTLI 462

Query: 55  LRHNLDVMHIEKNNGESL 2
           LRHNLDVMHI+KN  +S+
Sbjct: 463 LRHNLDVMHIKKNICDSI 480


>gb|AAD55677.1| putative transposase protein [Zea mays]
          Length = 793

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/138 (51%), Positives = 93/138 (67%)
 Frame = -1

Query: 415 SGWSTKGKLVCPSCHEQTSSTRLQKGNKFCYMSHRRSLPLDHMYRRNKSSFDNYAEWREA 236
           SGWSTKGK  CP CH+ T    L+ G+K CYM HRR LP+DH +R+NK+SF+N  E RE 
Sbjct: 428 SGWSTKGKFACPYCHKDTDFLWLKCGSKHCYMGHRRFLPMDHRWRKNKASFNNTVETREP 487

Query: 235 PKPLTGHDVCVQLSGYDEIIFGKGEHDTAG*KRK*DDNNLPHNWKKISIFFELPYWKDLC 56
           P PL+G  V  Q   +++I FGK        +++ ++    HNW+K SIFFEL YW+ L 
Sbjct: 488 PVPLSGEGVLQQYESFEQITFGKSTRK----RKQREEETRWHNWRKKSIFFELQYWEKLL 543

Query: 55  LRHNLDVMHIEKNNGESL 2
           +RHNLDVMHIEKN  +S+
Sbjct: 544 VRHNLDVMHIEKNICDSI 561


>emb|CAA40555.1| TNP2 [Antirrhinum majus]
          Length = 752

 Score =  150 bits (379), Expect = 1e-34
 Identities = 79/139 (56%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
 Frame = -1

Query: 415 SGWSTKGKLVCPSCHEQTSSTRLQKGNKFCYMSHRRSLPLDHMYRRNKSSFDNYAEWREA 236
           SGWSTKG+L CPSCH+ T S  LQK +K+CYM HRR L   H YR++  SFD   E+R A
Sbjct: 435 SGWSTKGELACPSCHKDTCSKYLQKSHKYCYMGHRRFLNRYHPYRKDTKSFDGNEEYRRA 494

Query: 235 PKPLTGHDVCVQLSGYDEIIFGKGEHDTAG*KRK*DDN-NLPHNWKKISIFFELPYWKDL 59
           P  LTG  V  +++G++ I FGK          K DDN  LP NWKK SIFF+LPYWKD 
Sbjct: 495 PIALTGDMVSEEITGFN-IKFGK----------KVDDNPTLPLNWKKRSIFFDLPYWKDS 543

Query: 58  CLRHNLDVMHIEKNNGESL 2
            LRHN DVMHIEKN  ES+
Sbjct: 544 LLRHNFDVMHIEKNVCESI 562


>emb|CAN82098.1| hypothetical protein VITISV_022259 [Vitis vinifera]
          Length = 1025

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/123 (57%), Positives = 82/123 (66%)
 Frame = -1

Query: 370 EQTSSTRLQKGNKFCYMSHRRSLPLDHMYRRNKSSFDNYAEWREAPKPLTGHDVCVQLSG 191
           E  SS RLQ G K+CYM HRR LP+DH +RR+K SFD   E R APK L G +V  QL G
Sbjct: 258 EDCSSYRLQNGRKWCYMGHRRFLPIDHRFRRDKKSFDENEEHRAAPKQLYGEBVLHQLDG 317

Query: 190 YDEIIFGKGEHDTAG*KRK*DDNNLPHNWKKISIFFELPYWKDLCLRHNLDVMHIEKNNG 11
            + I  GK   +    KRK +   L HNWKK SIFF+LPYWK L LRHNLDVMHIEKN  
Sbjct: 318 MEHITLGKTSKNKMLAKRKREHVELEHNWKKKSIFFQLPYWKTLILRHNLDVMHIEKNIC 377

Query: 10  ESL 2
           +S+
Sbjct: 378 DSI 380


>gb|AAM18727.1|AC092548_5 putative TNP2-like transposon protein [Oryza sativa Japonica Group]
          Length = 1571

 Score =  132 bits (332), Expect = 3e-29
 Identities = 71/138 (51%), Positives = 86/138 (62%)
 Frame = -1

Query: 415 SGWSTKGKLVCPSCHEQTSSTRLQKGNKFCYMSHRRSLPLDHMYRRNKSSFDNYAEWREA 236
           SG STKGKL CP CH++T+S  L+KG KFCYM HR  L   H +R +++SFD   E R  
Sbjct: 443 SGHSTKGKLACPVCHKETNSMWLKKGQKFCYMGHRCFLRRSHRWRNDRTSFDGTKESRGP 502

Query: 235 PKPLTGHDVCVQLSGYDEIIFGKGEHDTAG*KRK*DDNNLPHNWKKISIFFELPYWKDLC 56
           P  L+G DV  Q+     II  K        K K   ++   NWKK SIFFELPY+K L 
Sbjct: 503 PMELSGDDVLKQVQDLQGIILSKDMSK----KTKVSRSDRGDNWKKRSIFFELPYFKTLL 558

Query: 55  LRHNLDVMHIEKNNGESL 2
           LRHNLDVMHIEKN  +S+
Sbjct: 559 LRHNLDVMHIEKNICDSI 576


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