BLASTX nr result

ID: Cimicifuga21_contig00036713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036713
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   165   6e-46
ref|XP_003615634.1| Pleiotropic drug resistance ABC transporter ...   159   3e-43
gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]        159   3e-43
ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis...   159   3e-43
ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrat...   159   4e-43

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  165 bits (417), Expect(2) = 6e-46
 Identities = 78/88 (88%), Positives = 86/88 (97%)
 Frame = -3

Query: 264 VGGTKHNLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDE 85
           VGG KH+++TDY+LKVLGLDVC+ET+VGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDE
Sbjct: 297 VGGKKHSISTDYVLKVLGLDVCSETVVGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDE 356

Query: 84  ISTGLDSSTTYQIVKCVRNFVHLMDATV 1
           ISTGLDSSTTYQIVKC+ NFVHLM+ATV
Sbjct: 357 ISTGLDSSTTYQIVKCIGNFVHLMEATV 384



 Score = 44.3 bits (103), Expect(2) = 6e-46
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -1

Query: 332 KDLTSLEKERNVRPNPEIDAFMK 264
           +DL  LEKERNVRPNPE+DAFMK
Sbjct: 271 EDLVRLEKERNVRPNPEVDAFMK 293


>ref|XP_003615634.1| Pleiotropic drug resistance ABC transporter family protein
           [Medicago truncatula] gi|355516969|gb|AES98592.1|
           Pleiotropic drug resistance ABC transporter family
           protein [Medicago truncatula]
          Length = 1487

 Score =  159 bits (401), Expect(2) = 3e-43
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = -3

Query: 264 VGGTKHNLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDE 85
           VGG KH++ TDYILKVLGLDVC++TIVGN+M RGVSGGQRKRVTTGEMIVGPRKTLFMDE
Sbjct: 293 VGGKKHSVNTDYILKVLGLDVCSDTIVGNEMTRGVSGGQRKRVTTGEMIVGPRKTLFMDE 352

Query: 84  ISTGLDSSTTYQIVKCVRNFVHLMDATV 1
           ISTGLDSSTTYQIVKC++NFVH M+ATV
Sbjct: 353 ISTGLDSSTTYQIVKCIKNFVHQMEATV 380



 Score = 41.2 bits (95), Expect(2) = 3e-43
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1

Query: 332 KDLTSLEKERNVRPNPEIDAFMK 264
           KDL  LE ERN+RP+PEIDAFMK
Sbjct: 267 KDLGHLENERNIRPSPEIDAFMK 289


>gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]
          Length = 1443

 Score =  159 bits (403), Expect(2) = 3e-43
 Identities = 75/88 (85%), Positives = 85/88 (96%)
 Frame = -3

Query: 264 VGGTKHNLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDE 85
           V G KH+++TDY+LKVLGLDVC++T+VGNDM+RGVSGGQRKRVTTGEM VGPRKTLFMDE
Sbjct: 316 VKGEKHSVSTDYVLKVLGLDVCSDTMVGNDMMRGVSGGQRKRVTTGEMTVGPRKTLFMDE 375

Query: 84  ISTGLDSSTTYQIVKCVRNFVHLMDATV 1
           ISTGLDSSTT+QIVKC+RNFVHLMDATV
Sbjct: 376 ISTGLDSSTTFQIVKCIRNFVHLMDATV 403



 Score = 40.4 bits (93), Expect(2) = 3e-43
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1

Query: 332 KDLTSLEKERNVRPNPEIDAFMK 264
           KDLT LEKER +RP+ EIDAFMK
Sbjct: 290 KDLTRLEKERGIRPSSEIDAFMK 312


>ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis thaliana]
           gi|75326886|sp|Q7PC88.1|AB31G_ARATH RecName: Full=ABC
           transporter G family member 31; Short=ABC transporter
           ABCG.31; Short=AtABCG31; AltName: Full=Probable
           pleiotropic drug resistance protein 3
           gi|28144325|tpg|DAA00871.1| TPA_exp: PDR3 ABC
           transporter [Arabidopsis thaliana]
           gi|330253231|gb|AEC08325.1| ABC transporter G family
           member 31 [Arabidopsis thaliana]
          Length = 1426

 Score =  159 bits (403), Expect(2) = 3e-43
 Identities = 75/88 (85%), Positives = 85/88 (96%)
 Frame = -3

Query: 264 VGGTKHNLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDE 85
           V G KH+++TDY+LKVLGLDVC++T+VGNDM+RGVSGGQRKRVTTGEM VGPRKTLFMDE
Sbjct: 299 VKGEKHSVSTDYVLKVLGLDVCSDTMVGNDMMRGVSGGQRKRVTTGEMTVGPRKTLFMDE 358

Query: 84  ISTGLDSSTTYQIVKCVRNFVHLMDATV 1
           ISTGLDSSTT+QIVKC+RNFVHLMDATV
Sbjct: 359 ISTGLDSSTTFQIVKCIRNFVHLMDATV 386



 Score = 40.4 bits (93), Expect(2) = 3e-43
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1

Query: 332 KDLTSLEKERNVRPNPEIDAFMK 264
           KDLT LEKER +RP+ EIDAFMK
Sbjct: 273 KDLTRLEKERGIRPSSEIDAFMK 295


>ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325079|gb|EFH55499.1| ATPDR3/PDR3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1428

 Score =  159 bits (402), Expect(2) = 4e-43
 Identities = 74/88 (84%), Positives = 85/88 (96%)
 Frame = -3

Query: 264 VGGTKHNLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDE 85
           V G KH+++TDY+L+VLGLDVC++T+VGNDM+RGVSGGQRKRVTTGEM VGPRKTLFMDE
Sbjct: 299 VSGEKHSVSTDYVLRVLGLDVCSDTMVGNDMMRGVSGGQRKRVTTGEMTVGPRKTLFMDE 358

Query: 84  ISTGLDSSTTYQIVKCVRNFVHLMDATV 1
           ISTGLDSSTT+QIVKC+RNFVHLMDATV
Sbjct: 359 ISTGLDSSTTFQIVKCIRNFVHLMDATV 386



 Score = 40.4 bits (93), Expect(2) = 4e-43
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1

Query: 332 KDLTSLEKERNVRPNPEIDAFMK 264
           KDLT LEKER +RP+ EIDAFMK
Sbjct: 273 KDLTRLEKERGIRPSSEIDAFMK 295


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