BLASTX nr result

ID: Cimicifuga21_contig00036709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036709
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278708.1| PREDICTED: probable beta-1,3-galactosyltrans...   180   9e-44
ref|XP_002518935.1| Beta-1,3-galactosyltransferase sqv-2, putati...   169   2e-40
ref|XP_004145877.1| PREDICTED: probable beta-1,3-galactosyltrans...   148   5e-34
ref|XP_004165512.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...   145   3e-33
ref|XP_002317052.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_002278708.1| PREDICTED: probable beta-1,3-galactosyltransferase 6 [Vitis
           vinifera] gi|297742464|emb|CBI34613.3| unnamed protein
           product [Vitis vinifera]
          Length = 405

 Score =  180 bits (457), Expect = 9e-44
 Identities = 95/142 (66%), Positives = 114/142 (80%)
 Frame = +1

Query: 1   VSTRWVTLFCISSFCFGVLVIHRLWDVSDPDKFDEENSSIKTSQKRELLPSSNCEKKGTS 180
           VSTRWV++FCI+SFCFGVLVI+RLW + DP K DE  SS+K +Q  EL P  NC+KK TS
Sbjct: 16  VSTRWVSVFCIASFCFGVLVINRLWVIPDPVKIDEA-SSMKKNQLGELQPIVNCDKKDTS 74

Query: 181 IQAEEVFDRVSQTHNVIMSLEETISSLEMQLATARAAKESNQGVSTMVTKLRTKQYKGGQ 360
           +QA ++  +VSQTH+VIM+L++TISSLEMQLA ARA+K   +  S MVTK  T+Q K  Q
Sbjct: 75  VQAGDILSQVSQTHDVIMTLDKTISSLEMQLAAARASKGDGEEGSPMVTKPGTEQVKERQ 134

Query: 361 KVFFVMGIMTAFSSRKRRDSIR 426
           KVFFVMGIMTAFSSRKRRDSIR
Sbjct: 135 KVFFVMGIMTAFSSRKRRDSIR 156


>ref|XP_002518935.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
           gi|223541922|gb|EEF43468.1|
           Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus
           communis]
          Length = 403

 Score =  169 bits (428), Expect = 2e-40
 Identities = 88/142 (61%), Positives = 106/142 (74%)
 Frame = +1

Query: 1   VSTRWVTLFCISSFCFGVLVIHRLWDVSDPDKFDEENSSIKTSQKRELLPSSNCEKKGTS 180
           VSTRWV++FCI+SF  GVLV++R W + DP K DEE SS+   Q +   P  NCEKK TS
Sbjct: 13  VSTRWVSIFCIASFFLGVLVVNRFWTIPDPAKVDEEASSVNEYQSKLSHPVLNCEKKETS 72

Query: 181 IQAEEVFDRVSQTHNVIMSLEETISSLEMQLATARAAKESNQGVSTMVTKLRTKQYKGGQ 360
           +QA ++  +VSQTHNVIM+L++TISSLEMQLA ARA K  ++  S M TK  T   K  Q
Sbjct: 73  VQAGDILSQVSQTHNVIMTLDKTISSLEMQLAAARAVKGDSEEGSPMGTKSGTDPLKERQ 132

Query: 361 KVFFVMGIMTAFSSRKRRDSIR 426
           KVFFVMGI+TAFSSRKRRDSIR
Sbjct: 133 KVFFVMGIITAFSSRKRRDSIR 154


>ref|XP_004145877.1| PREDICTED: probable beta-1,3-galactosyltransferase 6-like [Cucumis
           sativus]
          Length = 401

 Score =  148 bits (373), Expect = 5e-34
 Identities = 83/141 (58%), Positives = 100/141 (70%)
 Frame = +1

Query: 4   STRWVTLFCISSFCFGVLVIHRLWDVSDPDKFDEENSSIKTSQKRELLPSSNCEKKGTSI 183
           S RWV LFCI+SF  GV V+ R W V DP + DEE +S+   Q +   P  NCEKK TS 
Sbjct: 14  SPRWVFLFCIASFFLGVFVVDRFWAVPDPVETDEE-ASVDKVQSKTSHPIVNCEKKATSF 72

Query: 184 QAEEVFDRVSQTHNVIMSLEETISSLEMQLATARAAKESNQGVSTMVTKLRTKQYKGGQK 363
           QA+ +  +VSQTH+VIM+L++TISSLE+QLA ARA+K  N   S MVT+   K  K   K
Sbjct: 73  QAD-ILSQVSQTHDVIMTLDKTISSLEVQLAAARASKADNDEGSPMVTEPGAKILKERPK 131

Query: 364 VFFVMGIMTAFSSRKRRDSIR 426
           VFFVMGI+TAFSSRKRRDSIR
Sbjct: 132 VFFVMGIITAFSSRKRRDSIR 152


>ref|XP_004165512.1| PREDICTED: LOW QUALITY PROTEIN: probable
           beta-1,3-galactosyltransferase 6-like, partial [Cucumis
           sativus]
          Length = 286

 Score =  145 bits (367), Expect = 3e-33
 Identities = 82/141 (58%), Positives = 99/141 (70%)
 Frame = +1

Query: 4   STRWVTLFCISSFCFGVLVIHRLWDVSDPDKFDEENSSIKTSQKRELLPSSNCEKKGTSI 183
           S RWV LFCI+SF  GV V+ R W V DP + DEE +S+   Q +   P  NCEKK  S 
Sbjct: 14  SPRWVXLFCIASFFLGVFVVDRFWAVPDPVETDEE-ASVDKVQSKTSHPIVNCEKKEASF 72

Query: 184 QAEEVFDRVSQTHNVIMSLEETISSLEMQLATARAAKESNQGVSTMVTKLRTKQYKGGQK 363
           QA+ +  +VSQTH+VIM+L++TISSLE+QLA ARA+K  N   S MVT+   K  K   K
Sbjct: 73  QAD-ILSQVSQTHDVIMTLDKTISSLEVQLAAARASKADNDEGSPMVTEPGAKILKERPK 131

Query: 364 VFFVMGIMTAFSSRKRRDSIR 426
           VFFVMGI+TAFSSRKRRDSIR
Sbjct: 132 VFFVMGIITAFSSRKRRDSIR 152


>ref|XP_002317052.1| predicted protein [Populus trichocarpa] gi|222860117|gb|EEE97664.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  139 bits (350), Expect = 2e-31
 Identities = 79/143 (55%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
 Frame = +1

Query: 1   VSTRWVTLFCISSFCFGVLVIHRL-WDVSDPDKFDEENSSIKTSQKRELLPSSNCEKKGT 177
           VSTRWV LFCI+SF  GVLV++RL + +S   + D+E SS+K  Q     P  +C+K   
Sbjct: 13  VSTRWVFLFCIASFFLGVLVVNRLRFFLSFSCQMDDEASSLKKDQLTAEHPPVDCQK--- 69

Query: 178 SIQAEEVFDRVSQTHNVIMSLEETISSLEMQLATARAAKESNQGVSTMVTKLRTKQYKGG 357
             QA ++  +VSQTH+VIM+L++TISS+E+QLA+ARAAK  N+ VS MV K   +  K  
Sbjct: 70  --QARDILSQVSQTHDVIMALDKTISSMEVQLASARAAKGDNENVSPMVIKSGNEHLKER 127

Query: 358 QKVFFVMGIMTAFSSRKRRDSIR 426
            KVFFVMGI+TAFSSR+RRDSIR
Sbjct: 128 PKVFFVMGIITAFSSRRRRDSIR 150


Top