BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036660
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24
ref|XP_002441545.1| hypothetical protein SORBIDRAFT_09g029090 [S...   112   2e-23
gb|AFW79264.1| putative pentatricopeptide repeat family protein ...   112   3e-23

>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   DIDVFVGSAIIDMYGKCGKTFIARNAFVGLHNRNVVLWTAIMSSYAQNECFEEALNLCQE 181
           + D +V SAII+MYGKCGK+ +AR  F GL +RNVVLWTA+M+S  QN CFEEALNL  +
Sbjct: 266 ECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSK 325

Query: 182 MMLEGVQPNEYTYAVMLNSCAGLSALR 262
           M  E V+ NE+TYAV+LN+CAGLSA R
Sbjct: 326 MEQENVKSNEFTYAVLLNACAGLSARR 352



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +2

Query: 23  SAIIDMYGKCGKTFIARNAFVGLHNRNVVLWTAIMSSYAQNECFEEALNLCQEMMLEG-V 199
           +++I+ Y K  +  IA N F  +  RNVV W+A+M+ Y  N    + + L ++M+ EG V
Sbjct: 70  NSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNV 129

Query: 200 QPNEYTYAVMLNSC 241
            PNEY  A+ ++SC
Sbjct: 130 SPNEYILAIAISSC 143


>ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = +2

Query: 8   DVFVGSAIIDMYGKCGKTFIARNAFVGLHNRNVVLWTAIMSSYAQNECFEEALNLCQEMM 187
           D FVGS +IDMYGKCG+   ARN F GL NRNVV+WTA+M++Y QN  FEE+LNL   M 
Sbjct: 255 DEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMD 314

Query: 188 LEGVQPNEYTYAVMLNSCAGLSALR 262
            EG  PNEYT+AV+LN+CAG++ALR
Sbjct: 315 REGTLPNEYTFAVLLNACAGIAALR 339


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/86 (62%), Positives = 66/86 (76%)
 Frame = +2

Query: 2   DIDVFVGSAIIDMYGKCGKTFIARNAFVGLHNRNVVLWTAIMSSYAQNECFEEALNLCQE 181
           + D FV SAIIDMYGKCG    AR  F  L  +NVV WTAI+++Y+QN CFEEALN   E
Sbjct: 262 EYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPE 321

Query: 182 MMLEGVQPNEYTYAVMLNSCAGLSAL 259
           M ++G+ PNEYT+AV+LNSCAG+SAL
Sbjct: 322 MEVDGLLPNEYTFAVLLNSCAGISAL 347



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +2

Query: 23  SAIIDMYGKCGKTFIARNAFVGLHNRNVVLWTAIMSSYAQNECFEEALNLCQEMM-LEGV 199
           +++I++Y KC +  +AR  F G+  RNVV W A+M+ Y  N    E L L + M+ ++ +
Sbjct: 66  NSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYM 125

Query: 200 QPNEYTYAVMLNSCA 244
           +PNEY +A +++SC+
Sbjct: 126 RPNEYIFATIISSCS 140


>ref|XP_002441545.1| hypothetical protein SORBIDRAFT_09g029090 [Sorghum bicolor]
           gi|241946830|gb|EES19975.1| hypothetical protein
           SORBIDRAFT_09g029090 [Sorghum bicolor]
          Length = 501

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/87 (59%), Positives = 70/87 (80%)
 Frame = +2

Query: 2   DIDVFVGSAIIDMYGKCGKTFIARNAFVGLHNRNVVLWTAIMSSYAQNECFEEALNLCQE 181
           +++V+VGSA++DMYGKC     A +AF  L  +NVV WTA+M++Y QNE +E+AL L  +
Sbjct: 241 ELNVYVGSALVDMYGKCDHAHEANHAFEVLPEKNVVSWTAVMTAYNQNELYEDALQLFLD 300

Query: 182 MMLEGVQPNEYTYAVMLNSCAGLSALR 262
           M +EGVQPNE+TYAV+LNSCAGL+ALR
Sbjct: 301 MEMEGVQPNEFTYAVVLNSCAGLAALR 327


>gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = +2

Query: 2   DIDVFVGSAIIDMYGKCGKTFIARNAFVGLHNRNVVLWTAIMSSYAQNECFEEALNLCQE 181
           +++V+VGSA++DMYGKC     A  AF  L  +NVV WTA+M++Y QNE +E+AL L  +
Sbjct: 241 ELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLD 300

Query: 182 MMLEGVQPNEYTYAVMLNSCAGLSALR 262
           M +EGVQPNE+TYAV LNSCAGL+ALR
Sbjct: 301 MEMEGVQPNEFTYAVALNSCAGLAALR 327