BLASTX nr result

ID: Cimicifuga21_contig00036649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036649
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002339676.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002304957.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002309840.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002869784.1| hypothetical protein ARALYDRAFT_492546 [Arab...    62   6e-08

>ref|XP_002339676.1| predicted protein [Populus trichocarpa] gi|222831999|gb|EEE70476.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
 Frame = -2

Query: 233 YLIILLSRLFLFHIHVQAQDP--IRELCSNSANYTSNSQFQANLNVLLRSLLTNGTQ--- 69
           + I+LLS L L  I  ++QDP  +   CSN   YT NS +QANLN+LL SL++N T+   
Sbjct: 6   FFIVLLSSLSLATI-TKSQDPSFLYNSCSNDTTYTRNSTYQANLNLLLSSLVSNATRNNL 64

Query: 68  DGFFNTTIGANPDLVHGLVQCR 3
           DGF+N++IG +PD V+GL  CR
Sbjct: 65  DGFYNSSIGLDPDDVYGLFLCR 86


>ref|XP_002304957.1| predicted protein [Populus trichocarpa] gi|222847921|gb|EEE85468.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
 Frame = -2

Query: 233 YLIILLSRLFLFHIHVQAQDP--IRELCSNSANYTSNSQFQANLNVLLRSLLTNGTQ--- 69
           + I LLS L L  I  ++QDP  +   CSN   YT NS +QANLN+LL SL++N T+   
Sbjct: 6   FFIALLSLLSLATI-TKSQDPSYLYRSCSNETTYTRNSTYQANLNLLLSSLVSNATRNNL 64

Query: 68  DGFFNTTIGANPDLVHGLVQCR 3
           +GF+N+++G +PD V+GL  CR
Sbjct: 65  NGFYNSSLGLDPDDVYGLFLCR 86


>ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
 Frame = -2

Query: 224 ILLSRLFLFHIHVQAQDP--IRELCSNSANYTSNSQFQANLNVLLRSLLTNGTQ---DGF 60
           +LLS L L  I  QAQDP  +   C N+  +T NS +QANLN+LL SL +N T+   +GF
Sbjct: 9   VLLSLLSLAII-TQAQDPTFLYPYCPNTTTFTRNSTYQANLNLLLSSLSSNATRNNINGF 67

Query: 59  FNTTIGANPDLVHGLVQCR 3
           +N + G +PD V+G+  CR
Sbjct: 68  YNVSAGQDPDAVYGMFLCR 86


>ref|XP_002309840.1| predicted protein [Populus trichocarpa] gi|222852743|gb|EEE90290.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = -2

Query: 158 CSNSANYTSNSQFQANLNVLLRSLLTNGTQDGFFNTTIGANPDLVHGLVQC 6
           C NS NYTS S +Q NLN+ L SL  N +  G++ +T+G NP+LV+GL+ C
Sbjct: 2   CDNSMNYTSGSAYQQNLNLTLTSLAANASLTGYYISTVGQNPNLVYGLINC 52


>ref|XP_002869784.1| hypothetical protein ARALYDRAFT_492546 [Arabidopsis lyrata subsp.
           lyrata] gi|297315620|gb|EFH46043.1| hypothetical protein
           ARALYDRAFT_492546 [Arabidopsis lyrata subsp. lyrata]
          Length = 662

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
 Frame = -2

Query: 206 FLFHIHVQAQDP--IRELCSNSANYTSNSQFQANLNVLLRSLLTNGT--QDGFFNTTIGA 39
           FL    V AQDP  +  +CSN+ANY+SNS +  NL  LL SL +       GF N T+G 
Sbjct: 15  FLTSFRVSAQDPTYVYHICSNTANYSSNSLYNTNLRTLLASLSSRNASYSTGFQNATVGQ 74

Query: 38  NPDLVHGLVQCR 3
            PD V GL  CR
Sbjct: 75  APDRVTGLFNCR 86


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