BLASTX nr result

ID: Cimicifuga21_contig00036641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036641
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515302.1| DNA replication regulator dpb11, putative [R...   204   1e-50
ref|XP_003591424.1| BRCT domain-containing protein [Medicago tru...   203   2e-50
ref|XP_003535960.1| PREDICTED: BRCT domain-containing protein At...   203   2e-50
ref|XP_002301504.1| predicted protein [Populus trichocarpa] gi|2...   202   6e-50
ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|2...   199   4e-49

>ref|XP_002515302.1| DNA replication regulator dpb11, putative [Ricinus communis]
           gi|223545782|gb|EEF47286.1| DNA replication regulator
           dpb11, putative [Ricinus communis]
          Length = 1069

 Score =  204 bits (518), Expect = 1e-50
 Identities = 102/173 (58%), Positives = 120/173 (69%)
 Frame = +2

Query: 119 SPSKIXXXXXXXXXXXDSSQQAKVGSKLVNGGGVDVGESNAPSCTHVIVDRVVYDDSECV 298
           SPSK            D     +V +KL++GGGVD G+ N  +CTHVIVD++VY+D  C+
Sbjct: 5   SPSKTFLGVRFVLFGFDPINLRQVRAKLIDGGGVDAGQYNE-NCTHVIVDKIVYNDPICI 63

Query: 299 VARAHGKTVVTALWVEHCLDVGMLVDAASILYRPVKDLNGISGAKSLSMCLTGYQRQDRD 478
            AR   KT+VT LWV+H  D+G++VDA SI+YRP++DLNGI GAKSL MCLTGYQRQDRD
Sbjct: 64  AARNDRKTLVTGLWVDHSYDIGLVVDATSIMYRPLRDLNGIPGAKSLIMCLTGYQRQDRD 123

Query: 479 DIMRMVGLMGAYFSKPLVANKVTHLICYKFXXXXXXXXXXXXXXXXVNHRWLE 637
           DIM MV LMGA FSKPLVANKVTHLICYKF                VNHRWLE
Sbjct: 124 DIMTMVSLMGAQFSKPLVANKVTHLICYKFEGEKYELANKLKKIKLVNHRWLE 176


>ref|XP_003591424.1| BRCT domain-containing protein [Medicago truncatula]
           gi|355480472|gb|AES61675.1| BRCT domain-containing
           protein [Medicago truncatula]
          Length = 1346

 Score =  203 bits (517), Expect = 2e-50
 Identities = 101/157 (64%), Positives = 114/157 (72%)
 Frame = +2

Query: 167 DSSQQAKVGSKLVNGGGVDVGESNAPSCTHVIVDRVVYDDSECVVARAHGKTVVTALWVE 346
           D   + K+  KLVNGGGVD G+ N  +CTHVIVD++ YDD  CV AR  GKT+VTALWVE
Sbjct: 22  DHLTENKIRFKLVNGGGVDAGK-NTGNCTHVIVDKIAYDDPVCVAAREDGKTLVTALWVE 80

Query: 347 HCLDVGMLVDAASILYRPVKDLNGISGAKSLSMCLTGYQRQDRDDIMRMVGLMGAYFSKP 526
           H  D+GM VDA S++YRP+K L+GI GAK L +CLTGY RQDRDDIM MVGLMGA FSKP
Sbjct: 81  HSADIGMPVDATSVMYRPLKKLDGIPGAKDLVVCLTGYLRQDRDDIMTMVGLMGAQFSKP 140

Query: 527 LVANKVTHLICYKFXXXXXXXXXXXXXXXXVNHRWLE 637
           LVANKVTHLICYKF                VNHRWLE
Sbjct: 141 LVANKVTHLICYKFEGEKYELAKRLATIKLVNHRWLE 177


>ref|XP_003535960.1| PREDICTED: BRCT domain-containing protein At4g02110-like [Glycine
           max]
          Length = 200

 Score =  203 bits (516), Expect = 2e-50
 Identities = 103/153 (67%), Positives = 111/153 (72%)
 Frame = +2

Query: 179 QAKVGSKLVNGGGVDVGESNAPSCTHVIVDRVVYDDSECVVARAHGKTVVTALWVEHCLD 358
           Q ++  KL NGGGVDVG+    SCTHVIVD V YDD  CV AR   KTVVTALWVEH  D
Sbjct: 26  QNQIRFKLANGGGVDVGQYGG-SCTHVIVDNVAYDDPVCVAARNDRKTVVTALWVEHSAD 84

Query: 359 VGMLVDAASILYRPVKDLNGISGAKSLSMCLTGYQRQDRDDIMRMVGLMGAYFSKPLVAN 538
           +GM VDA S++YRP+KDL+GI GAK L MCLTGY RQDRDDIM MVGLMGA FSKPLVAN
Sbjct: 85  IGMPVDATSVMYRPLKDLDGIPGAKDLIMCLTGYLRQDRDDIMTMVGLMGAQFSKPLVAN 144

Query: 539 KVTHLICYKFXXXXXXXXXXXXXXXXVNHRWLE 637
           KVTHLICYKF                VNHRWLE
Sbjct: 145 KVTHLICYKFEGEKYELAKKLGTIKLVNHRWLE 177


>ref|XP_002301504.1| predicted protein [Populus trichocarpa] gi|222843230|gb|EEE80777.1|
           predicted protein [Populus trichocarpa]
          Length = 1221

 Score =  202 bits (513), Expect = 6e-50
 Identities = 100/157 (63%), Positives = 116/157 (73%)
 Frame = +2

Query: 167 DSSQQAKVGSKLVNGGGVDVGESNAPSCTHVIVDRVVYDDSECVVARAHGKTVVTALWVE 346
           D   + +V SKLVNGGGVD  + +  +CTHVIVD++VYDD  CV AR  GKTVV  LWV 
Sbjct: 22  DPLSETEVKSKLVNGGGVDAVQYSE-NCTHVIVDKIVYDDPVCVGARNDGKTVVRGLWVN 80

Query: 347 HCLDVGMLVDAASILYRPVKDLNGISGAKSLSMCLTGYQRQDRDDIMRMVGLMGAYFSKP 526
           H  D+GM VDA SI+YRP++DLNGI  AK+++MCLTGYQRQDRDDIM MVGLMGA+FSKP
Sbjct: 81  HSFDIGMPVDATSIMYRPLRDLNGIPRAKNITMCLTGYQRQDRDDIMTMVGLMGAHFSKP 140

Query: 527 LVANKVTHLICYKFXXXXXXXXXXXXXXXXVNHRWLE 637
           LVAN+VTHLICYKF                VNHRWLE
Sbjct: 141 LVANRVTHLICYKFEGEKYELANKMKKMKLVNHRWLE 177


>ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|222861753|gb|EEE99295.1|
           predicted protein [Populus trichocarpa]
          Length = 1282

 Score =  199 bits (506), Expect = 4e-49
 Identities = 100/150 (66%), Positives = 114/150 (76%)
 Frame = +2

Query: 119 SPSKIXXXXXXXXXXXDSSQQAKVGSKLVNGGGVDVGESNAPSCTHVIVDRVVYDDSECV 298
           SPSK            D   ++KV SKLV GGG+D  + +  +CTHVIVD++VYDD  CV
Sbjct: 6   SPSKTFLGVRFVLVGFDPVNKSKVKSKLVGGGGIDAVQYSE-NCTHVIVDKIVYDDPVCV 64

Query: 299 VARAHGKTVVTALWVEHCLDVGMLVDAASILYRPVKDLNGISGAKSLSMCLTGYQRQDRD 478
            AR  GKTVVT LWV+H  D+GM VDA SI+YRP++DLNGI GAK+L MCLTGYQRQDRD
Sbjct: 65  GARNDGKTVVTGLWVDHSFDIGMPVDATSIMYRPLRDLNGIPGAKNLIMCLTGYQRQDRD 124

Query: 479 DIMRMVGLMGAYFSKPLVANKVTHLICYKF 568
           DIM MVGLMGA FSKPLVANKVTHLICYKF
Sbjct: 125 DIMTMVGLMGAQFSKPLVANKVTHLICYKF 154


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