BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036640
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_002524945.1| pentatricopeptide repeat-containing protein,...   146   1e-33
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   122   2e-26

>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/113 (69%), Positives = 96/113 (84%)
 Frame = +2

Query: 77  TDKASFLLEKSKSINHLLQIHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTN 256
           T++ + L++KSK+I+HLLQIHA + R+GL  HPILNFKLQRSY+SLGRLDYS ++F  T 
Sbjct: 30  TNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQ 89

Query: 257 NPNVFFWTSIIHGYTLHGLHSDALSLYSQMLTQGVEPNQFTFSSILKCCPLEP 415
           NP+VFFWT+IIHG+ L GLH  AL+ Y+QMLTQGVEPN FTFSSILK CP+EP
Sbjct: 90  NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP 142



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/90 (35%), Positives = 47/90 (52%)
 Frame = +2

Query: 134 IHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNNPNVFFWTSIIHGYTLHGL 313
           +H+ I  NG+  +  +   L   YS  G L+ +R VFD  ++ +V  W S+I GY +HG 
Sbjct: 278 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 337

Query: 314 HSDALSLYSQMLTQGVEPNQFTFSSILKCC 403
             +AL L+  M   G+ P   TF  IL  C
Sbjct: 338 SQEALQLFKSMCRMGLHPTNITFIGILSAC 367


>ref|XP_002524945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535780|gb|EEF37442.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 417

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/111 (63%), Positives = 88/111 (79%)
 Frame = +2

Query: 80  DKASFLLEKSKSINHLLQIHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNN 259
           +K + +++KSKSIN+L QIHA + R+ L  HPIL+FKLQRSYSSLG L++S ++F+ T N
Sbjct: 35  EKLAIIIDKSKSINNLHQIHAFLYRHNLHHHPILSFKLQRSYSSLGHLNHSLTLFNQTQN 94

Query: 260 PNVFFWTSIIHGYTLHGLHSDALSLYSQMLTQGVEPNQFTFSSILKCCPLE 412
           PNVFF+TSIIH +T H LH  AL  Y+QMLTQ V PN FTFSSILK CPLE
Sbjct: 95  PNVFFYTSIIHAHTFHKLHYQALLFYAQMLTQKVTPNAFTFSSILKSCPLE 145



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/90 (33%), Positives = 46/90 (51%)
 Frame = +2

Query: 134 IHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNNPNVFFWTSIIHGYTLHGL 313
           +H+ I  NG+  +  +   L   YS  G L+ +R VF+     +V  W S++ GY  HG 
Sbjct: 282 VHSYIQNNGIEINAHVGSALIDMYSKCGNLEDARLVFERIKYKDVVVWNSMVTGYATHGF 341

Query: 314 HSDALSLYSQMLTQGVEPNQFTFSSILKCC 403
             DAL L+++M   G +P   TF  +L  C
Sbjct: 342 SQDALQLFNEMCGLGYQPTDITFIGVLSAC 371


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/112 (58%), Positives = 80/112 (71%)
 Frame = +2

Query: 80  DKASFLLEKSKSINHLLQIHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNN 259
           D  + L++ SKS +HLLQIHAA+LR GL  HPILNFKLQRSY+SLG L +S ++F  T N
Sbjct: 24  DNLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPN 83

Query: 260 PNVFFWTSIIHGYTLHGLHSDALSLYSQMLTQGVEPNQFTFSSILKCCPLEP 415
           PNVF WT II+ +    L   ALS YSQMLT  ++PN FT SS+LK C L P
Sbjct: 84  PNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHP 135



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/90 (33%), Positives = 48/90 (53%)
 Frame = +2

Query: 134 IHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNNPNVFFWTSIIHGYTLHGL 313
           +H+ +  NG+  +  +   L   Y   G L+ +R VFD     +V  W S+I GY +HG 
Sbjct: 278 VHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGF 337

Query: 314 HSDALSLYSQMLTQGVEPNQFTFSSILKCC 403
             +AL L+ +M   GV+P+  TF ++L  C
Sbjct: 338 SDEALQLFHEMCCIGVKPSDITFVAVLTAC 367


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/111 (58%), Positives = 84/111 (75%)
 Frame = +2

Query: 80  DKASFLLEKSKSINHLLQIHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNN 259
           ++ + L++KSKS+ HLLQIHA++LR GL  +PILNFKLQRSY++LGRLD S  VF+T + 
Sbjct: 48  ERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDE 107

Query: 260 PNVFFWTSIIHGYTLHGLHSDALSLYSQMLTQGVEPNQFTFSSILKCCPLE 412
           PNVF +++IIH +    L   A   YSQML+ GVEPN FTFSS+LK C LE
Sbjct: 108 PNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLE 158



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/90 (35%), Positives = 45/90 (50%)
 Frame = +2

Query: 134 IHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNNPNVFFWTSIIHGYTLHGL 313
           IH+ I   G+  +  +   L   YS  G L+ +R VFD   + +V  W S+I GY +HG 
Sbjct: 295 IHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGF 354

Query: 314 HSDALSLYSQMLTQGVEPNQFTFSSILKCC 403
              AL L+ +M   G +P   TF  IL  C
Sbjct: 355 SQHALQLFEEMTETGHKPTDITFIGILSAC 384


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = +2

Query: 188 KLQRSYSSLGRLDYSRSVFDTTNNPNVFFWTSIIHGYTLHGLHSDALSLYSQMLTQGVEP 367
           KLQRSY+SLGRLDYS ++F  T NP+VFFWT+IIHG+ L GLH  AL+ Y+QMLTQGVEP
Sbjct: 14  KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73

Query: 368 NQFTFSSILKCCPLEP 415
           N FTFSSILK CP+EP
Sbjct: 74  NAFTFSSILKLCPIEP 89



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/90 (34%), Positives = 46/90 (51%)
 Frame = +2

Query: 134 IHAAILRNGLAQHPILNFKLQRSYSSLGRLDYSRSVFDTTNNPNVFFWTSIIHGYTLHGL 313
           +H+ I  NG+  +  +   L   YS  G L+ +R VFD  ++ +V  W S+I GY + G 
Sbjct: 225 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGF 284

Query: 314 HSDALSLYSQMLTQGVEPNQFTFSSILKCC 403
             +AL L+  M   G+ P   TF  IL  C
Sbjct: 285 SQEALQLFKSMCRMGLHPTNITFIGILSAC 314