BLASTX nr result

ID: Cimicifuga21_contig00036628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036628
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330794.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003560978.1| PREDICTED: putative leucine-rich repeat rece...    57   1e-06
ref|XP_002336268.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_003551548.1| PREDICTED: probable LRR receptor-like serine...    57   2e-06

>ref|XP_002330794.1| predicted protein [Populus trichocarpa] gi|222872596|gb|EEF09727.1|
           predicted protein [Populus trichocarpa]
          Length = 966

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -2

Query: 247 GNILSVQLPASFCK*T*LTRLQLGENSFTGSIPPTRGNCQN-LLLNPSYNNLIGTIPKEA 71
           GN LS  +P+SF   T LT L + ++S  GSIPP  G C N LLLN S NNL G IPKE 
Sbjct: 387 GNKLSGNIPSSFGNLTLLTHLYMYQSSLKGSIPPELGKCLNLLLLNLSQNNLTGAIPKEV 446

Query: 70  GLGLP 56
            L +P
Sbjct: 447 -LSIP 450


>ref|XP_003560978.1| PREDICTED: putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase At2g24130-like
           [Brachypodium distachyon]
          Length = 1007

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -2

Query: 247 GNILSVQLPASFCK*T*LTRLQLGENSFTGSIPPTRGNCQNL-LLNPSYNNLIGTIPKEA 71
           GNIL+  +P +F   T L RL L  N  TG+IPP+ G+CQNL +L+ SYN L G IP   
Sbjct: 391 GNILAGAIPDTFSNLTQLRRLMLHHNRLTGAIPPSLGDCQNLEILDLSYNGLRGEIPAHV 450

Query: 70  GLGL 59
             GL
Sbjct: 451 VAGL 454


>ref|XP_002336268.1| predicted protein [Populus trichocarpa] gi|222833132|gb|EEE71609.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -2

Query: 247 GNILSVQLPASFCK*T*LTRLQLGENSFTGSIPPTRGNCQNLL-LNPSYNNLIGTIPKE 74
           GN LS  +P+S    T LT L LG+N+  GSIP + G C+NLL L+ S NNL GTIPKE
Sbjct: 29  GNRLSGNIPSSLGNLTSLTSLYLGQNNLQGSIPSSLGLCENLLELDLSQNNLSGTIPKE 87


>ref|XP_003551548.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Glycine max]
          Length = 1020

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -2

Query: 247 GNILSVQLPASFCK*T*LTRLQLGENSFTGSIPPTRGNCQNLL-LNPSYNNLIGTIPKE 74
           GN  S  +P+S    T LTRLQ+ EN+F GSIP   G CQ+LL LN S+N L GTIP++
Sbjct: 418 GNNFSGVIPSSIGNLTRLTRLQMEENNFEGSIPANLGKCQSLLMLNLSHNMLNGTIPRQ 476


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