BLASTX nr result

ID: Cimicifuga21_contig00036625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036625
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|35548...    56   3e-06

>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +3

Query: 24  HNHIVAFDIEGETFRDVPYPDYSADEHSNGIIVTALDGNLCLLCHSNFDC-HVWLMRDYG 200
           +N I+AFDI  ETF+ VP P++S ++ +  +    L+G LC +C+   +C  +W+M +YG
Sbjct: 236 NNSIIAFDIVNETFQQVPQPNWSDNQLNFQVDAGVLEGRLCAMCNCGHECIDLWVMEEYG 295

Query: 201 LGESW 215
           + ESW
Sbjct: 296 VKESW 300


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +3

Query: 33  IVAFDIEGETFRDVPYPDYSADEHSNGIIVTALDGNLCLLCHSNF-DCHVWLMRDYGLGE 209
           IVAFD+  E F+ +P PDYS++EH   + V  L G LC+ C+ N     +W+M++YG+ E
Sbjct: 240 IVAFDLGAEEFKIIPQPDYSSNEHEMNVGV--LGGCLCVFCNKNCKQVEIWVMKEYGVKE 297

Query: 210 SW 215
           SW
Sbjct: 298 SW 299


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +3

Query: 33  IVAFDIEGETFRDVPYPDYSADEHSNGIIVTALDGNLCLLCHSNFDC-HVWLMRDYGLGE 209
           ++ FDI  + F ++P P+Y +   S  + V  L+GNLC++C+  + C  VW+MR+YG+ E
Sbjct: 245 VLGFDIRNDKFFELPQPNYESKGMSFQVDVGVLEGNLCVMCNYEYVCVDVWVMREYGMKE 304

Query: 210 SW 215
           SW
Sbjct: 305 SW 306


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +3

Query: 33  IVAFDIEGETFRDVPYPDYSADEHSNGIIVTALDGNLCLLCHSNFDC-HVWLMRDYGLGE 209
           ++ FDI  + F ++P PDY     +  + V  L+GNLC++C+    C  VW+M++YG+ E
Sbjct: 237 VLGFDIRDDKFFELPQPDYENKGMNFHVDVGVLEGNLCVMCNYEHVCVDVWVMKEYGVKE 296

Query: 210 SW 215
           SW
Sbjct: 297 SW 298


>ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|355483132|gb|AES64335.1|
           F-box protein [Medicago truncatula]
          Length = 772

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 39/61 (63%)
 Frame = +3

Query: 33  IVAFDIEGETFRDVPYPDYSADEHSNGIIVTALDGNLCLLCHSNFDCHVWLMRDYGLGES 212
           IV+FD+E E+FR++  PDY      + I+   +D  LC+LCH +    VWLM++YG  +S
Sbjct: 635 IVSFDLETESFREILQPDYGGMSVFSPILNVMMDC-LCILCHGDTLADVWLMKEYGNEDS 693

Query: 213 W 215
           W
Sbjct: 694 W 694


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