BLASTX nr result

ID: Cimicifuga21_contig00036618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036618
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519757.1| multidrug resistance protein 1, 2, putative ...    92   6e-17
ref|XP_003593843.1| ABC transporter B family member [Medicago tr...    87   1e-15
ref|XP_002271185.1| PREDICTED: ABC transporter B family member 9...    86   2e-15
emb|CAN77320.1| hypothetical protein VITISV_009891 [Vitis vinifera]    86   2e-15
ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana] gi|3784...    84   2e-14

>ref|XP_002519757.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223541174|gb|EEF42730.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1249

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/61 (68%), Positives = 52/61 (85%)
 Frame = +1

Query: 166 KVPFYKLFAFADGLDILLMSIGSIFAAGNGLTMPIMALLFGQLIDTFGATNPSNLVHEVS 345
           KVP YKLFAFAD LD++LM +G++ A GNGL  P+M LLFGQLI++FG T+PSN+VHEVS
Sbjct: 7   KVPIYKLFAFADRLDMVLMIVGTVSAIGNGLAQPLMTLLFGQLINSFGTTDPSNVVHEVS 66

Query: 346 K 348
           K
Sbjct: 67  K 67


>ref|XP_003593843.1| ABC transporter B family member [Medicago truncatula]
           gi|355482891|gb|AES64094.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 926

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/72 (58%), Positives = 55/72 (76%)
 Frame = +1

Query: 133 KTEDTEKGQTLKVPFYKLFAFADGLDILLMSIGSIFAAGNGLTMPIMALLFGQLIDTFGA 312
           K E+ +     KVPFYKLF FAD LD++LM IG I A  NGL+ P+M L+FG+LI+TFG+
Sbjct: 8   KDEENKPKAEEKVPFYKLFNFADKLDVILMIIGFICAVANGLSQPLMTLIFGKLINTFGS 67

Query: 313 TNPSNLVHEVSK 348
           T+PS++V EVSK
Sbjct: 68  TDPSHIVKEVSK 79


>ref|XP_002271185.1| PREDICTED: ABC transporter B family member 9-like [Vitis vinifera]
          Length = 1270

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/66 (59%), Positives = 53/66 (80%)
 Frame = +1

Query: 151 KGQTLKVPFYKLFAFADGLDILLMSIGSIFAAGNGLTMPIMALLFGQLIDTFGATNPSNL 330
           K    KVPFYKLF+FAD LD+ LM +G++ A  NG+T P+M L+FGQLI+TFG ++PS++
Sbjct: 17  KADEEKVPFYKLFSFADKLDVGLMIVGTVCAMANGMTQPLMTLIFGQLINTFGDSDPSHV 76

Query: 331 VHEVSK 348
           VHEVS+
Sbjct: 77  VHEVSR 82


>emb|CAN77320.1| hypothetical protein VITISV_009891 [Vitis vinifera]
          Length = 2006

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/66 (59%), Positives = 53/66 (80%)
 Frame = +1

Query: 151 KGQTLKVPFYKLFAFADGLDILLMSIGSIFAAGNGLTMPIMALLFGQLIDTFGATNPSNL 330
           K    KVPFYKLF+FAD LD+ LM +G++ A  NG+T P+M L+FGQLI+TFG ++PS++
Sbjct: 17  KADEEKVPFYKLFSFADKLDVGLMIVGTVCAMANGMTQPLMTLIFGQLINTFGDSDPSHV 76

Query: 331 VHEVSK 348
           VHEVS+
Sbjct: 77  VHEVSR 82


>ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana]
           gi|378405145|sp|Q9M0M2.2|AB9B_ARATH RecName: Full=ABC
           transporter B family member 9; Short=ABC transporter
           ABCB.9; Short=AtABCB9; AltName: Full=Multidrug
           resistance protein 9; AltName: Full=P-glycoprotein 9
           gi|332658588|gb|AEE83988.1| P-glycoprotein 9
           [Arabidopsis thaliana]
          Length = 1236

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = +1

Query: 133 KTEDTEKGQTLKVPFYKLFAFADGLDILLMSIGSIFAAGNGLTMPIMALLFGQLIDTFGA 312
           K+     G   KV F+KLF+FAD  D++LM++G+I AAGNGLT P M L+FGQLI+ FG 
Sbjct: 4   KSSKKNDGGNQKVSFFKLFSFADKTDVVLMTVGTIAAAGNGLTQPFMTLIFGQLINAFGT 63

Query: 313 TNPSNLVHEVSK 348
           T+P ++V EV K
Sbjct: 64  TDPDHMVREVWK 75


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