BLASTX nr result

ID: Cimicifuga21_contig00036614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036614
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   132   4e-29
ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arab...   130   1e-28
ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi...   124   8e-27
ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glyci...   123   2e-26
ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   123   2e-26

>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
           gi|297733877|emb|CBI15124.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/115 (56%), Positives = 82/115 (71%)
 Frame = +2

Query: 2   LIPIARKYTLDIILISGGFDAASGDPMGGCEVTPIGYFHMMRKLMEFANGRIVMALEGGY 181
           LIP+A+ +  DI++IS GFDAA GDP+GGC VTP GY  M++KLMEF+ G+I+MALEGGY
Sbjct: 257 LIPVAKDFNPDIVIISAGFDAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKIIMALEGGY 316

Query: 182 DLLSTANSVLACVRALLGDSLDISSCMAPPLPATQKVIDKVRKVLRHSWPTLVKD 346
           +L+S ANSVLACV  LL D     S  A P  +T +VI  VR+ L   WPTL  +
Sbjct: 317 NLVSLANSVLACVEVLLEDKPIAGSSEAYPFESTWRVIQAVRQELSAFWPTLADE 371


>ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arabidopsis lyrata subsp.
           lyrata] gi|297312247|gb|EFH42671.1| hypothetical protein
           ARALYDRAFT_919345 [Arabidopsis lyrata subsp. lyrata]
          Length = 660

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/117 (58%), Positives = 83/117 (70%)
 Frame = +2

Query: 2   LIPIARKYTLDIILISGGFDAASGDPMGGCEVTPIGYFHMMRKLMEFANGRIVMALEGGY 181
           LIP+AR++  DIIL+S GFDAA GDP+GGC VTP  Y  M++KLMEFA+G+IVMALEGGY
Sbjct: 272 LIPVAREFNPDIILLSAGFDAAIGDPLGGCRVTPYAYSVMLKKLMEFAHGKIVMALEGGY 331

Query: 182 DLLSTANSVLACVRALLGDSLDISSCMAPPLPATQKVIDKVRKVLRHSWPTLVKDAS 352
           +L S A S LACV+ LLGD     S  A P  +T +VI  VRK L   WP+L  + S
Sbjct: 332 NLDSIAKSSLACVQVLLGDKQIHGSSEAYPFESTWRVIQAVRKRLCAYWPSLADELS 388


>ref|XP_002305854.1| histone deacetylase [Populus trichocarpa]
           gi|222848818|gb|EEE86365.1| histone deacetylase [Populus
           trichocarpa]
          Length = 646

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/115 (53%), Positives = 81/115 (70%)
 Frame = +2

Query: 2   LIPIARKYTLDIILISGGFDAASGDPMGGCEVTPIGYFHMMRKLMEFANGRIVMALEGGY 181
           LIP+A+K+  D+I++S GFDAA GDP+GGC VTP GY  M++KLM+FA G+I++ALEGGY
Sbjct: 253 LIPVAKKFDPDMIIVSAGFDAAVGDPLGGCCVTPYGYSVMLKKLMDFAQGKIMLALEGGY 312

Query: 182 DLLSTANSVLACVRALLGDSLDISSCMAPPLPATQKVIDKVRKVLRHSWPTLVKD 346
           +L S ANS LAC++ LL D     S  A P  +T +VI  VRK L   WP L  +
Sbjct: 313 NLDSIANSFLACMKVLLEDKPVSGSVEAYPFESTWRVIQAVRKKLSPYWPALADE 367


>ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glycine max]
          Length = 652

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/115 (52%), Positives = 80/115 (69%)
 Frame = +2

Query: 2   LIPIARKYTLDIILISGGFDAASGDPMGGCEVTPIGYFHMMRKLMEFANGRIVMALEGGY 181
           L+P+A+++  DII++S GFDAA GDP+GGC VTP GY  ++ KLM FA GRIV+ LEGGY
Sbjct: 260 LLPVAKEFNPDIIIVSAGFDAAVGDPLGGCLVTPFGYSVLLEKLMNFAEGRIVLILEGGY 319

Query: 182 DLLSTANSVLACVRALLGDSLDISSCMAPPLPATQKVIDKVRKVLRHSWPTLVKD 346
           +L S + S+ AC+  LL D   I S  A P  +T +VI  VR+VL   WPTL ++
Sbjct: 320 NLDSISKSMHACLEVLLADQPVIGSAEAYPFESTWRVIQAVRQVLSPFWPTLARE 374


>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
           gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
           putative [Ricinus communis]
          Length = 654

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/115 (53%), Positives = 79/115 (68%)
 Frame = +2

Query: 2   LIPIARKYTLDIILISGGFDAASGDPMGGCEVTPIGYFHMMRKLMEFANGRIVMALEGGY 181
           LIP+A+++  D+I+IS GFDAA GDP+GGC +TP GY  M++KLM+FANG+IV+ALEGGY
Sbjct: 260 LIPVAKEFNPDMIIISAGFDAAVGDPLGGCRITPYGYSVMLKKLMDFANGKIVLALEGGY 319

Query: 182 DLLSTANSVLACVRALLGDSLDISSCMAPPLPATQKVIDKVRKVLRHSWPTLVKD 346
           +L S ANS  AC+  LL       S  A P  +T +VI  VRK L   W TL  +
Sbjct: 320 NLESIANSFFACMEVLLESKPIAGSSEAYPFESTWRVIQAVRKKLSGYWATLADE 374


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