BLASTX nr result

ID: Cimicifuga21_contig00036568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036568
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]    88   1e-29
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    82   7e-29
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]                86   3e-15
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          86   3e-15
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695...    85   5e-15

>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
          Length = 1556

 Score = 87.8 bits (216), Expect(3) = 1e-29
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -2

Query: 385  VFMEQPPGFKDTHMSNHVCQSHRALYGLKQAPRAWFD*FSSFLIEYGFYCSPADPSLCV 209
            + MEQPPG  D     HVC+  +ALYGLKQAPRAWFD FS+FL++YGF+CS ADPSL +
Sbjct: 1127 IHMEQPPGMADLEHPTHVCKLQKALYGLKQAPRAWFDRFSAFLLKYGFFCSLADPSLFI 1185



 Score = 45.1 bits (105), Expect(3) = 1e-29
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = -3

Query: 144  TSTSL-DIFVTQLGAQFSIKDLGMMHYFLGVRVQSFNGGICLSQSKY 7
            +ST+L   F+  L ++F++KDLG +HYFLG+ +     G+ LSQS Y
Sbjct: 1207 SSTALVSTFIQLLSSEFAMKDLGQIHYFLGIEISQTADGLHLSQSHY 1253



 Score = 42.0 bits (97), Expect(3) = 1e-29
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = -3

Query: 462  KGYNHEEGLDFNETFSPVIKPATIQKFL 379
            KGY+  +GLD+ ETFSPVIKP TI+  L
Sbjct: 1072 KGYHQVDGLDYTETFSPVIKPGTIRMVL 1099


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 82.4 bits (202), Expect(3) = 7e-29
 Identities = 37/58 (63%), Positives = 45/58 (77%)
 Frame = -2

Query: 388  KVFMEQPPGFKDTHMSNHVCQSHRALYGLKQAPRAWFD*FSSFLIEYGFYCSPADPSL 215
            +V+MEQPPG+ D     HVC+  RALYGLKQAPRAWF  FSSFL+++GF+ S AD SL
Sbjct: 961  EVYMEQPPGYTDPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLKHGFHSSQADSSL 1018



 Score = 52.8 bits (125), Expect(3) = 7e-29
 Identities = 24/47 (51%), Positives = 35/47 (74%)
 Frame = -3

Query: 147  NTSTSLDIFVTQLGAQFSIKDLGMMHYFLGVRVQSFNGGICLSQSKY 7
            +T + +  F+T+L  +FS+KDLG +HYFLGV VQ+   G+ LSQ+KY
Sbjct: 1042 STPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQANEKGLFLSQTKY 1088



 Score = 37.4 bits (85), Expect(3) = 7e-29
 Identities = 14/28 (50%), Positives = 22/28 (78%)
 Frame = -3

Query: 462 KGYNHEEGLDFNETFSPVIKPATIQKFL 379
           +G++   GLDF +TFSPV++PAT++  L
Sbjct: 907 QGFSQVHGLDFGDTFSPVVRPATVRIIL 934


>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
          Length = 1309

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = -2

Query: 385  VFMEQPPGFKDTHMSNHVCQSHRALYGLKQAPRAWFD*FSSFLIEYGFYCSPADPSLCV 209
            VFM QP GF D +  NHVC+  +ALYGLKQAPRAWFD FS+FL+++GF CS +DPSL V
Sbjct: 843  VFMFQPSGFVDPNKPNHVCRLTKALYGLKQAPRAWFDTFSNFLLDFGFECSTSDPSLFV 901


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = -2

Query: 385  VFMEQPPGFKDTHMSNHVCQSHRALYGLKQAPRAWFD*FSSFLIEYGFYCSPADPSLCV 209
            VFM QP GF D +  NHVC+  +ALYGLKQAPRAWFD FS+FL+++GF CS +DPSL V
Sbjct: 1000 VFMFQPSGFVDPNKPNHVCRLTKALYGLKQAPRAWFDTFSNFLLDFGFECSTSDPSLFV 1058


>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
            putative protein [Arabidopsis thaliana]
          Length = 1318

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = -2

Query: 385  VFMEQPPGFKDTHMSNHVCQSHRALYGLKQAPRAWFD*FSSFLIEYGFYCSPADPSLCV 209
            V+M QP GF D    +HVC  H+++YGLKQ+PRAWFD FS+FL+E+GF+CS +DPSL +
Sbjct: 836  VYMTQPAGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFI 894