BLASTX nr result
ID: Cimicifuga21_contig00036553
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00036553 (247 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003578773.1| PREDICTED: A/G-specific adenine DNA glycosyl... 53 5e-13 dbj|BAK05852.1| predicted protein [Hordeum vulgare subsp. vulgare] 53 5e-13 gb|ABA96719.2| retrotransposon protein, putative, unclassified [... 50 2e-12 gb|EEE52948.1| hypothetical protein OsJ_35582 [Oryza sativa Japo... 50 2e-12 ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2... 52 4e-12 >ref|XP_003578773.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Brachypodium distachyon] Length = 461 Score = 52.8 bits (125), Expect(2) = 5e-13 Identities = 28/48 (58%), Positives = 33/48 (68%) Frame = -3 Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQVT 33 FLLE AK + G EFP+T S L +V GIG YTAG+I SI FN+VT Sbjct: 138 FLLEGAKQIAEKG---EFPSTASTLRQVRGIGDYTAGAIASIAFNEVT 182 Score = 46.2 bits (108), Expect(2) = 5e-13 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = -2 Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169 LA A+QEEVN WAGLGYYRRARF L Sbjct: 115 LAAATQEEVNEMWAGLGYYRRARFLL 140 >dbj|BAK05852.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 329 Score = 52.8 bits (125), Expect(2) = 5e-13 Identities = 28/48 (58%), Positives = 33/48 (68%) Frame = -3 Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQVT 33 FLLE AK + G EFP+T S L +V GIG YTAG+I SI FN+VT Sbjct: 139 FLLEGAKQIAEKG---EFPSTASTLRQVRGIGDYTAGAIASIAFNEVT 183 Score = 46.2 bits (108), Expect(2) = 5e-13 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = -2 Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169 LA A+QEEVN WAGLGYYRRARF L Sbjct: 116 LAAATQEEVNEMWAGLGYYRRARFLL 141 >gb|ABA96719.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1795 Score = 50.4 bits (119), Expect(2) = 2e-12 Identities = 28/47 (59%), Positives = 32/47 (68%) Frame = -3 Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQV 36 FLLE AK + G EFP T SAL +V GIG YTAG+I SI FN+V Sbjct: 151 FLLEGAKQIVEKG---EFPRTASALREVRGIGDYTAGAIASIAFNEV 194 Score = 46.2 bits (108), Expect(2) = 2e-12 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = -2 Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169 LA A+QEEVN WAGLGYYRRARF L Sbjct: 128 LAAATQEEVNEMWAGLGYYRRARFLL 153 >gb|EEE52948.1| hypothetical protein OsJ_35582 [Oryza sativa Japonica Group] Length = 435 Score = 50.4 bits (119), Expect(2) = 2e-12 Identities = 28/47 (59%), Positives = 32/47 (68%) Frame = -3 Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQV 36 FLLE AK + G EFP T SAL +V GIG YTAG+I SI FN+V Sbjct: 150 FLLEGAKQIVEKG---EFPRTASALREVRGIGDYTAGAIASIAFNEV 193 Score = 46.2 bits (108), Expect(2) = 2e-12 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = -2 Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169 LA A+QEEVN WAGLGYYRRARF L Sbjct: 127 LAAATQEEVNEMWAGLGYYRRARFLL 152 >ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1| predicted protein [Populus trichocarpa] Length = 480 Score = 51.6 bits (122), Expect(2) = 4e-12 Identities = 30/49 (61%), Positives = 34/49 (69%), Gaps = 2/49 (4%) Frame = -3 Query: 176 FLLERAKML--GGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQV 36 FLLE AKM+ GGDG FP VS+L KV GIG YTAG+I SI F +V Sbjct: 148 FLLEGAKMIVAGGDG----FPKIVSSLRKVPGIGDYTAGAIASIAFKEV 192 Score = 44.3 bits (103), Expect(2) = 4e-12 Identities = 21/26 (80%), Positives = 21/26 (80%) Frame = -2 Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169 LA AS EEVN WAGLGYYRRARF L Sbjct: 125 LAQASLEEVNEMWAGLGYYRRARFLL 150