BLASTX nr result

ID: Cimicifuga21_contig00036553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036553
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578773.1| PREDICTED: A/G-specific adenine DNA glycosyl...    53   5e-13
dbj|BAK05852.1| predicted protein [Hordeum vulgare subsp. vulgare]     53   5e-13
gb|ABA96719.2| retrotransposon protein, putative, unclassified [...    50   2e-12
gb|EEE52948.1| hypothetical protein OsJ_35582 [Oryza sativa Japo...    50   2e-12
ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2...    52   4e-12

>ref|XP_003578773.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Brachypodium
           distachyon]
          Length = 461

 Score = 52.8 bits (125), Expect(2) = 5e-13
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = -3

Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQVT 33
           FLLE AK +   G   EFP+T S L +V GIG YTAG+I SI FN+VT
Sbjct: 138 FLLEGAKQIAEKG---EFPSTASTLRQVRGIGDYTAGAIASIAFNEVT 182



 Score = 46.2 bits (108), Expect(2) = 5e-13
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169
           LA A+QEEVN  WAGLGYYRRARF L
Sbjct: 115 LAAATQEEVNEMWAGLGYYRRARFLL 140


>dbj|BAK05852.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 329

 Score = 52.8 bits (125), Expect(2) = 5e-13
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = -3

Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQVT 33
           FLLE AK +   G   EFP+T S L +V GIG YTAG+I SI FN+VT
Sbjct: 139 FLLEGAKQIAEKG---EFPSTASTLRQVRGIGDYTAGAIASIAFNEVT 183



 Score = 46.2 bits (108), Expect(2) = 5e-13
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169
           LA A+QEEVN  WAGLGYYRRARF L
Sbjct: 116 LAAATQEEVNEMWAGLGYYRRARFLL 141


>gb|ABA96719.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1795

 Score = 50.4 bits (119), Expect(2) = 2e-12
 Identities = 28/47 (59%), Positives = 32/47 (68%)
 Frame = -3

Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQV 36
           FLLE AK +   G   EFP T SAL +V GIG YTAG+I SI FN+V
Sbjct: 151 FLLEGAKQIVEKG---EFPRTASALREVRGIGDYTAGAIASIAFNEV 194



 Score = 46.2 bits (108), Expect(2) = 2e-12
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169
           LA A+QEEVN  WAGLGYYRRARF L
Sbjct: 128 LAAATQEEVNEMWAGLGYYRRARFLL 153


>gb|EEE52948.1| hypothetical protein OsJ_35582 [Oryza sativa Japonica Group]
          Length = 435

 Score = 50.4 bits (119), Expect(2) = 2e-12
 Identities = 28/47 (59%), Positives = 32/47 (68%)
 Frame = -3

Query: 176 FLLERAKMLGGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQV 36
           FLLE AK +   G   EFP T SAL +V GIG YTAG+I SI FN+V
Sbjct: 150 FLLEGAKQIVEKG---EFPRTASALREVRGIGDYTAGAIASIAFNEV 193



 Score = 46.2 bits (108), Expect(2) = 2e-12
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169
           LA A+QEEVN  WAGLGYYRRARF L
Sbjct: 127 LAAATQEEVNEMWAGLGYYRRARFLL 152


>ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score = 51.6 bits (122), Expect(2) = 4e-12
 Identities = 30/49 (61%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = -3

Query: 176 FLLERAKML--GGDGGEIEFPTTVSALLKVSGIGQYTAGSITSIVFNQV 36
           FLLE AKM+  GGDG    FP  VS+L KV GIG YTAG+I SI F +V
Sbjct: 148 FLLEGAKMIVAGGDG----FPKIVSSLRKVPGIGDYTAGAIASIAFKEV 192



 Score = 44.3 bits (103), Expect(2) = 4e-12
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = -2

Query: 246 LATASQEEVNATWAGLGYYRRARFSL 169
           LA AS EEVN  WAGLGYYRRARF L
Sbjct: 125 LAQASLEEVNEMWAGLGYYRRARFLL 150


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