BLASTX nr result

ID: Cimicifuga21_contig00036539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036539
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273842.1| PREDICTED: uncharacterized protein LOC100247...    69   3e-10
ref|XP_002300043.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002321608.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_004141192.1| PREDICTED: uncharacterized protein LOC101218...    60   1e-07
ref|XP_004152557.1| PREDICTED: uncharacterized protein LOC101203...    60   2e-07

>ref|XP_002273842.1| PREDICTED: uncharacterized protein LOC100247330 [Vitis vinifera]
           gi|296087638|emb|CBI34894.3| unnamed protein product
           [Vitis vinifera]
          Length = 329

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = -1

Query: 406 YSPGWYVLVGLLHIPCYAIFGFIIKMKHNLWTRWFPHSYQCRR 278
           ++P WY+ V L+HIPCYAIF  ++++KHNL ++WFP SYQC R
Sbjct: 287 FAPLWYLAVALMHIPCYAIFALVVEIKHNLLSKWFPQSYQCLR 329


>ref|XP_002300043.1| predicted protein [Populus trichocarpa] gi|222847301|gb|EEE84848.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = -1

Query: 409 SYSPGWYVLVGLLHIPCYAIFGFIIKMKHNLWTRWFPHSYQC 284
           SY+P WY+LV ++HIP Y +F   IK+KHNL T+WFP SY C
Sbjct: 289 SYAPLWYLLVAMMHIPSYGLFMLFIKIKHNLLTKWFPQSYSC 330


>ref|XP_002321608.1| predicted protein [Populus trichocarpa] gi|222868604|gb|EEF05735.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 22/43 (51%), Positives = 32/43 (74%)
 Frame = -1

Query: 406 YSPGWYVLVGLLHIPCYAIFGFIIKMKHNLWTRWFPHSYQCRR 278
           Y+P WY  V ++HIPCY +F FI+K+K  +++RWFP SY+  R
Sbjct: 305 YAPLWYFSVAVMHIPCYCVFAFIVKLKRTVFSRWFPDSYRSLR 347


>ref|XP_004141192.1| PREDICTED: uncharacterized protein LOC101218542 [Cucumis sativus]
          Length = 183

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = -1

Query: 406 YSPGWYVLVGLLHIPCYAIFGFIIKMKHNLWTRWFPHSYQC 284
           YSP WY+L+G +HIP Y IF  IIK+KH L  +WFP  Y C
Sbjct: 143 YSPLWYMLMGSIHIPSYGIFMLIIKLKHKLIMKWFPQPYHC 183


>ref|XP_004152557.1| PREDICTED: uncharacterized protein LOC101203045 [Cucumis sativus]
           gi|449487859|ref|XP_004157836.1| PREDICTED:
           uncharacterized protein LOC101223623 [Cucumis sativus]
          Length = 371

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -1

Query: 409 SYSPGWYVLVGLLHIPCYAIFGFIIKMKHNLWTRWFPHSYQCRR 278
           SY+P WY+ V L+HIPCY IF  I+K+KH++++   P SYQC R
Sbjct: 307 SYAPLWYLSVALMHIPCYGIFTLIMKLKHHVFSTRCPQSYQCMR 350


Top