BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036536
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    81   8e-14
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    80   2e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    80   2e-13
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    65   4e-09

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
 Frame = +1

Query: 4   FYAMSSTGNLESCDISSTKPQVTIVATSTVMNSNDFMYPIKSSEDLCVRSSNDLLYLVES 183
           FYA++  G +  CDISS  P+V+ + T                     ++  D+ YLV S
Sbjct: 222 FYAVNKAGQIVICDISSDSPRVSFMETPR-------------------QAGGDMQYLVNS 262

Query: 184 SEDLLCVKRKVVPRKIRGKH-------VPRTIGFKIFKLDAIQSQWVVLKSLRGHALFLG 342
            ++LL V R  +  +    H       + RTI F++F+LD    QW+ + +L   ALF+G
Sbjct: 263 GDELLLVTR-YLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIG 321

Query: 343 QNSSLSLLASEFSHCKPNHIYFTETY 420
           +NSSLSL A++FS C  N IY+T+ Y
Sbjct: 322 ENSSLSLSATDFSGCMGNCIYYTDDY 347


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
 Frame = +1

Query: 4   FYAMSSTGNLESCDISSTKPQVTIVATSTVMNSNDFMYPIKSSEDLCVRSSNDLLYLVES 183
           FYA++  G++  CD+S + P+V+I+                   ++  +   DL YLVES
Sbjct: 219 FYAVNKYGSIAVCDVSGSSPRVSII-------------------EMPQQFGGDLQYLVES 259

Query: 184 SEDLLCVKR------KVVPRKIRGKHVPRTIGFKIFKLDAIQSQWVVLKSLRGHALFLGQ 345
            E+LL V R       V P +     + RT  F++ +LD    +W V+ SL   ALFLG+
Sbjct: 260 GEELLLVTRYLDLTYDVEPDQT--SLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGE 317

Query: 346 NSSLSLLASEFSHCKPNHIYFTETYPE 426
           N SLSL + +F  CK N IY+T+ Y E
Sbjct: 318 NLSLSLSSVDFPGCKGNCIYYTDDYSE 344


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
 Frame = +1

Query: 4   FYAMSSTGNLESCDISSTKPQVTIVATSTVMNSNDFMYPIKSSEDLCVRSSNDLLYLVES 183
           FYA++  G++  CD+S + P+V+I+                   ++  +   DL YLVES
Sbjct: 219 FYAVNKYGSIAVCDVSGSSPRVSII-------------------EMPQQFGGDLQYLVES 259

Query: 184 SEDLLCVKRKVV----PRKIRGKHVPRTIGFKIFKLDAIQSQWVVLKSLRGHALFLGQNS 351
            E+LL V R +         +   + RT  F++ +LD+   +W V+ SL   ALFLG+N 
Sbjct: 260 GEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENL 319

Query: 352 SLSLLASEFSHCKPNHIYFTETYPE 426
           SLSL + +F  CK N IY+T+ Y E
Sbjct: 320 SLSLSSVDFPGCKGNCIYYTDDYSE 344


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/139 (30%), Positives = 67/139 (48%)
 Frame = +1

Query: 4   FYAMSSTGNLESCDISSTKPQVTIVATSTVMNSNDFMYPIKSSEDLCVRSSNDLLYLVES 183
           FYA++  G +  CD++   P+V+ + T   +                     D+ YLV S
Sbjct: 223 FYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGG-------------------DMQYLVSS 263

Query: 184 SEDLLCVKRKVVPRKIRGKHVPRTIGFKIFKLDAIQSQWVVLKSLRGHALFLGQNSSLSL 363
            + LL V R +         + +T  F++FKLD    +W  + SL    LF+G+NSSL+L
Sbjct: 264 GDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLAL 323

Query: 364 LASEFSHCKPNHIYFTETY 420
            AS  S C  + IY+T+ Y
Sbjct: 324 SASGLSGCMGDCIYYTDDY 342


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1   QFYAMSSTGNLESCDISSTKPQVTIVATSTVMNSNDFMYPIKSSEDLCVRSSNDLLYLVE 180
           +FYA+ +TG      I S  P ++++A S                        D   LVE
Sbjct: 208 EFYAIDNTGRTVVVAIGSP-PVLSLIADSVF--------------------GGDKKSLVE 246

Query: 181 SSEDLLCVKR---KVVPRKIRGKHVPRTIGFKIFKLDAIQSQWVVLKSLRGHALFLGQNS 351
           S+ +LL V     + + R+++     R + FK+FKLD I   WV ++SL    LFLG+ S
Sbjct: 247 SNGELLMVDTYFGQGIHRRMK-----RAVRFKVFKLDQIGHMWVEVESLGNRILFLGEKS 301

Query: 352 SLSLLASEFSHCKPNHIYFTETY 420
           + S +ASEF  C+ N IY+T T+
Sbjct: 302 TFSAVASEFCGCEGNCIYYTNTF 324