BLASTX nr result

ID: Cimicifuga21_contig00036528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036528
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|2...    87   4e-15
ref|XP_002512347.1| conserved hypothetical protein [Ricinus comm...    66   8e-09
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                60   6e-07
ref|XP_002513085.1| conserved hypothetical protein [Ricinus comm...    59   7e-07

>ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|222835929|gb|EEE74350.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
 Frame = +1

Query: 76  ILPKLSLRDCIRFAAVCGSCRSMAGENQNRHHRVPWLMISRNCDTQTATFFSLSESKIYN 255
           I  K+S+    RF   C + R          H +PWLM+S + + +T  FF + +SK Y 
Sbjct: 22  IASKVSVAGYHRFLLFCTAWRRTTSMRPPFSH-LPWLMLSNDRNKKTRGFFCIHDSKFYQ 80

Query: 256 LKLTDIASNSHCFGSSEGYLILANK-QGNFLFNPFSQTHITLPKQYVPRSDKFHSMEFQD 432
           + L  +   S C  SS G+ I+A+K +G+FLFNPFS   I LP  Y   +  +  +    
Sbjct: 81  IPLPRVVRRSWCARSSYGWFIMAHKTRGDFLFNPFSGVRIPLPTHY---NQPYSFVRPAS 137

Query: 433 YRYYLTKAILSTTIMPGTSQPGIPQYLVAALCSSVHFIEMCRPHHTEWSIF 585
             Y++TKAILS+   P     G    LVAAL   V  + +CRP    W+ F
Sbjct: 138 NPYFMTKAILSSEPTPENIAAG--HCLVAAL-FEVDSLGICRPGDHAWTCF 185


>ref|XP_002512347.1| conserved hypothetical protein [Ricinus communis]
           gi|223548308|gb|EEF49799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 475

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
 Frame = +1

Query: 43  LGLPEYLWVLTILPKLSLRDCIRFAAVCGSCRSMAGENQNRH----HRVPWLMISR---- 198
           L LP+ L  L I+ +L + D +R  +VC S R +A +   RH     + PWLM+S     
Sbjct: 40  LQLPDDLMKL-IIQRLDVTDRLRICSVCKSWRFLATQ---RHVPLPPQFPWLMLSPTKSK 95

Query: 199 ---------NCDTQTA---TFFSLSESKIYNLKLTDIASNSHCFGSSEGYLILANKQGN- 339
                    + D  T    TFF   + KI+NL+L        CFGSS+G+L +A K G  
Sbjct: 96  TNRTRLFPWSDDRSTCKQITFFDTVQGKIHNLELPKSLEGGWCFGSSKGWLFIA-KGGKK 154

Query: 340 ----FLFNPFSQTHI-------TLPKQYVPRSDKFHSMEFQDYRYYLTKAILSTTIMPGT 486
               FL NP S+ HI       T+P  Y       H  +F  + Y L   +         
Sbjct: 155 EPQVFLLNPISK-HILGLPSITTIPSYYNYLESLEHPYDFSSFIYKLDICV--------- 204

Query: 487 SQPGIPQYLVAALCSSVHFIEMCRPHHTEWSI 582
           S+    Q  + A+ ++   +  C+P   +W+I
Sbjct: 205 SEDASQQCTIVAILNTGEVLASCKPEDAKWTI 236


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
 Frame = +1

Query: 67  VLTILPKLSLRDCIRFAAVCGSCRSMAGENQ--NRHHRVPWLMI-----SRNCDTQTAT- 222
           +L IL +LS  D  R   VC    S+A + +   + HR+PWL+I       N  + T T 
Sbjct: 37  LLQILNRLSFVDVQRAKTVCSHWNSVAKQLKLYTKFHRIPWLLIPPQDEESNASSDTNTK 96

Query: 223 FFSLSESKIYNLKLT---DIASNSHCFGSSEGYLILANKQGN--FLFNPFSQTHITLP 381
            FS+ + ++Y+ K     +I   S C GSS GY+I  N + N  F+FNP ++    LP
Sbjct: 97  LFSIEDGQLYSSKYAASKEICCQSFCVGSSHGYMISINCERNNLFVFNPLTEKRTELP 154


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
 Frame = +1

Query: 94  LRDCIRFAAVCGSCRSMAGENQ--NRHHRVPWLMISRNCDTQTATFFSLSESKIYNLKLT 267
           + D + F  VC S  S+A +    N   R PWLM++   D +   FFSL    I N ++ 
Sbjct: 22  IEDYLNFGRVCKSWHSVATKANFNNDLCRAPWLMLAEEEDNEVRKFFSLYNGMILNKRIP 81

Query: 268 DIASNSHCFGSSEGYLILANKQGNF-LFNPFSQTHITLPKQYVPRSDKFHSMEFQDYRYY 444
             AS   C   S G+LI   ++G   L +PFS   I LP Q    + +++  +      +
Sbjct: 82  K-ASRKRCL-ESMGWLITVGEEGEISLLHPFSDVQIELPHQNT--TVEYNKHQTGALTCF 137

Query: 445 LTKAILSTTIMPGTSQPGIPQYLVAALCSSVHFIEMCRPHHTEWS 579
           + KA+LS       S      YL+  +     F+   RP    W+
Sbjct: 138 IGKAVLS------ASPSHTSDYLLMVIDGGSRFLSFWRPGDIRWT 176


>ref|XP_002513085.1| conserved hypothetical protein [Ricinus communis]
           gi|223548096|gb|EEF49588.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 27/135 (20%)
 Frame = +1

Query: 100 DCIRFAAVCGSCRSMAGENQNRHH-----RVPWLMISRNCDTQTAT----FFSLSESKIY 252
           D I FAAVC +CR +A  NQ+  +     +VPWLM+S+  + +  +    F +LS+ KIY
Sbjct: 24  DFIAFAAVCRACRLVAKHNQHYFNSSASAKVPWLMLSKKEEEEDYSRSWQFLNLSKGKIY 83

Query: 253 NLKLTD-----IASNSHCFGSSEG-------------YLILANKQGNFLFNPFSQTHITL 378
            + L +     +  +S+ + S  G             YLI   ++   L NPFS T   L
Sbjct: 84  KISLPEEGNSYLTLSSYTYRSIYGDNETQFYVASQGWYLIKEEEKYLSLLNPFSLTKFYL 143

Query: 379 PKQYVPRSDKFHSME 423
           P+  + R D ++S +
Sbjct: 144 PRNIIIRGDAYYSFK 158


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