BLASTX nr result

ID: Cimicifuga21_contig00036527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036527
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141700.1| PREDICTED: mitochondrial ubiquitin ligase ac...    86   4e-15
ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...    83   2e-14
ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus ...    83   3e-14
ref|XP_003547746.1| PREDICTED: mitochondrial ubiquitin ligase ac...    82   3e-14
ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase ac...    82   3e-14

>ref|XP_004141700.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Cucumis sativus] gi|449480528|ref|XP_004155921.1|
           PREDICTED: mitochondrial ubiquitin ligase activator of
           nfkb 1-like [Cucumis sativus]
          Length = 389

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +2

Query: 29  EATDAIPDGQLCVMCLFRRRRSAFVPCGHTVCCHRCAVSVERHFAPRCP 175
           E +  +PDGQLCV+CL RR+RSAF+PCGH VCC RCAVSVER  +P+CP
Sbjct: 326 ELSSHVPDGQLCVICLMRRKRSAFIPCGHLVCCERCAVSVERESSPKCP 374


>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|297743001|emb|CBI35868.3| unnamed
           protein product [Vitis vinifera]
          Length = 391

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 32/44 (72%), Positives = 39/44 (88%)
 Frame = +2

Query: 44  IPDGQLCVMCLFRRRRSAFVPCGHTVCCHRCAVSVERHFAPRCP 175
           +PDG+LCV+CL RR+RSAFVPCGH VCC RCA+SVER  +P+CP
Sbjct: 333 VPDGELCVICLMRRKRSAFVPCGHLVCCQRCALSVERELSPKCP 376


>ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223539404|gb|EEF40994.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 387

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +2

Query: 29  EATDAIPDGQLCVMCLFRRRRSAFVPCGHTVCCHRCAVSVERHFAPRCP 175
           E T  +PDGQLCV+CL RRRR+AF+PCGH VCC  CA+SVER  +P+CP
Sbjct: 324 EETVDVPDGQLCVICLMRRRRAAFIPCGHLVCCQICAISVEREVSPKCP 372


>ref|XP_003547746.1| PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1-like
           [Glycine max]
          Length = 383

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +2

Query: 44  IPDGQLCVMCLFRRRRSAFVPCGHTVCCHRCAVSVERHFAPRCP 175
           +PDGQLCV+CL RRRRS F+PCGH VCC  CA+SVER  AP+CP
Sbjct: 325 VPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCP 368


>ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Glycine max]
          Length = 388

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +2

Query: 44  IPDGQLCVMCLFRRRRSAFVPCGHTVCCHRCAVSVERHFAPRCP 175
           +PDGQLCV+CL RRRRS F+PCGH VCC  CA+SVER  AP+CP
Sbjct: 330 VPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCP 373


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