BLASTX nr result

ID: Cimicifuga21_contig00036495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036495
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...    58   2e-15
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    56   7e-15
emb|CBI35661.3| unnamed protein product [Vitis vinifera]               56   7e-15
gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Ze...    55   1e-14
ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [S...    55   1e-14

>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score = 57.8 bits (138), Expect(2) = 2e-15
 Identities = 28/68 (41%), Positives = 40/68 (58%)
 Frame = +2

Query: 146  FVFLPSKERHYGRKTQPLLKCDCDERVKDETLASCPSVLERAHHSLFAQLSFRNVNVRNI 325
            +++ P   R +G     LL+ D DER +D TLASC  V++R H + F   S    +VRNI
Sbjct: 1069 YIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIHQNFFTHRSIDEADVRNI 1128

Query: 326  LALEKQYI 349
            LA E++ I
Sbjct: 1129 LATEQKKI 1136



 Score = 49.3 bits (116), Expect(2) = 2e-15
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 31   KRGPKVKNLDDVKGMESAVVIIDDCESARPHNRLNLVMV 147
            +R PK K+L+ V GMESAVVIIDD     PHN+LNL++V
Sbjct: 1028 ERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVV 1066


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score = 55.8 bits (133), Expect(2) = 7e-15
 Identities = 29/68 (42%), Positives = 41/68 (60%)
 Frame = +2

Query: 146  FVFLPSKERHYGRKTQPLLKCDCDERVKDETLASCPSVLERAHHSLFAQLSFRNVNVRNI 325
            + + P   R +G     LL+ D DER +D TLAS  +V+ER H S F+  +   V+VRNI
Sbjct: 1080 YTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNI 1139

Query: 326  LALEKQYI 349
            LA E++ I
Sbjct: 1140 LASEQRKI 1147



 Score = 49.3 bits (116), Expect(2) = 7e-15
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 31   KRGPKVKNLDDVKGMESAVVIIDDCESARPHNRLNLVMV 147
            +R PK K+L+ V GMESAVVIIDD     PHN+LNL++V
Sbjct: 1039 ERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVV 1077


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 55.8 bits (133), Expect(2) = 7e-15
 Identities = 29/68 (42%), Positives = 41/68 (60%)
 Frame = +2

Query: 146  FVFLPSKERHYGRKTQPLLKCDCDERVKDETLASCPSVLERAHHSLFAQLSFRNVNVRNI 325
            + + P   R +G     LL+ D DER +D TLAS  +V+ER H S F+  +   V+VRNI
Sbjct: 1026 YTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNI 1085

Query: 326  LALEKQYI 349
            LA E++ I
Sbjct: 1086 LASEQRKI 1093



 Score = 49.3 bits (116), Expect(2) = 7e-15
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 31   KRGPKVKNLDDVKGMESAVVIIDDCESARPHNRLNLVMV 147
            +R PK K+L+ V GMESAVVIIDD     PHN+LNL++V
Sbjct: 985  ERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVV 1023


>gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Zea mays]
          Length = 1234

 Score = 54.7 bits (130), Expect(2) = 1e-14
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = +2

Query: 146  FVFLPSKERHYGRKTQPLLKCDCDERVKDETLASCPSVLERAHHSLFAQLSFRNVNVRNI 325
            + + P   R +G     LL+ D DER +D TLAS  +V+ER HH+ F+  +    +VR+I
Sbjct: 1079 YTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHPNLNEADVRSI 1138

Query: 326  LALEKQYI 349
            LA E++ I
Sbjct: 1139 LASEQRRI 1146



 Score = 49.3 bits (116), Expect(2) = 1e-14
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 31   KRGPKVKNLDDVKGMESAVVIIDDCESARPHNRLNLVMV 147
            +R PK K+LD V GMESAVVIIDD     PHNR NL++V
Sbjct: 1038 ERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNRHNLIVV 1076


>ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [Sorghum bicolor]
            gi|241935397|gb|EES08542.1| hypothetical protein
            SORBIDRAFT_05g019010 [Sorghum bicolor]
          Length = 1197

 Score = 54.7 bits (130), Expect(2) = 1e-14
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = +2

Query: 146  FVFLPSKERHYGRKTQPLLKCDCDERVKDETLASCPSVLERAHHSLFAQLSFRNVNVRNI 325
            + + P   R +G     LL+ D DER +D TLAS  +V+ER HH+ F+  +    +VR+I
Sbjct: 1040 YTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHPNLNEADVRSI 1099

Query: 326  LALEKQYI 349
            LA E++ I
Sbjct: 1100 LASEQRRI 1107



 Score = 49.3 bits (116), Expect(2) = 1e-14
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 31   KRGPKVKNLDDVKGMESAVVIIDDCESARPHNRLNLVMV 147
            +R PK K+LD V GMESAVVIIDD     PHNR NL++V
Sbjct: 999  ERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNRHNLIVV 1037


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