BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036477
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_003602247.1| Pentatricopeptide repeat-containing protein ...   107   8e-22
ref|XP_002516677.1| pentatricopeptide repeat-containing protein,...   105   4e-21
ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|NP_190493.1| pentatricopeptide repeat-containing protein [Ar...   101   7e-20

>ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Vitis vinifera]
          Length = 672

 Score =  108 bits (271), Expect = 4e-22
 Identities = 51/73 (69%), Positives = 62/73 (84%)
 Frame = +3

Query: 3   SSIRMGADAYNSVLQALSKNGKFDEALKLFDRMMGEHNHPMKLTVNLGSFNIMAEGFCDQ 182
           S IRM A A+NSVL ALSKNGKFDEA+ LF+RMM E+N P +L++NLGSFN+M +GFC  
Sbjct: 303 SKIRMSAVAFNSVLDALSKNGKFDEAMLLFERMMAEYNPPRRLSMNLGSFNVMVDGFCTA 362

Query: 183 GKFKEAIEVFRKM 221
           G+FK+AIEVFRKM
Sbjct: 363 GRFKDAIEVFRKM 375


>ref|XP_003602247.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491295|gb|AES72498.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 704

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/70 (71%), Positives = 59/70 (84%)
 Frame = +3

Query: 12  RMGADAYNSVLQALSKNGKFDEALKLFDRMMGEHNHPMKLTVNLGSFNIMAEGFCDQGKF 191
           +M   AYNSVL AL+KNGKFDEA++LFDRM+ EHN P KL VNLGSFN+M +G+C +GKF
Sbjct: 310 KMSDIAYNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKF 369

Query: 192 KEAIEVFRKM 221
           KEAIEVFR M
Sbjct: 370 KEAIEVFRSM 379


>ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544172|gb|EEF45696.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/73 (67%), Positives = 60/73 (82%)
 Frame = +3

Query: 3   SSIRMGADAYNSVLQALSKNGKFDEALKLFDRMMGEHNHPMKLTVNLGSFNIMAEGFCDQ 182
           S +RM A AYNSVL AL KNGKFD ALKLFDRM+ +HN P  L VNLGSFN++ +G+C Q
Sbjct: 316 SKVRMNAVAYNSVLDALCKNGKFDVALKLFDRMLQQHNPPRYLAVNLGSFNVIVDGYCAQ 375

Query: 183 GKFKEAIEVFRKM 221
           G+F++AI+VFRKM
Sbjct: 376 GRFEDAIDVFRKM 388


>ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Glycine max]
          Length = 631

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/70 (67%), Positives = 60/70 (85%)
 Frame = +3

Query: 12  RMGADAYNSVLQALSKNGKFDEALKLFDRMMGEHNHPMKLTVNLGSFNIMAEGFCDQGKF 191
           +M A  YNSVL ALSKNG+FDEAL+LFDRMM EH    +L+VNLGSFN++ +G+CD+G+F
Sbjct: 302 KMSAVGYNSVLDALSKNGRFDEALRLFDRMMKEHEPLKRLSVNLGSFNVIVDGYCDEGRF 361

Query: 192 KEAIEVFRKM 221
           +EA+EVFRKM
Sbjct: 362 EEAMEVFRKM 371


>ref|NP_190493.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183725|sp|Q9M3A8.1|PP273_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49240; AltName: Full=Protein EMBRYO DEFECTIVE 1796
           gi|6723394|emb|CAB66403.1| putative protein [Arabidopsis
           thaliana] gi|20466250|gb|AAM20442.1| putative protein
           [Arabidopsis thaliana] gi|31711738|gb|AAP68225.1|
           At3g49240 [Arabidopsis thaliana]
           gi|58013028|gb|AAW62967.1| mitochondrial
           embryo-defective 1796 [Arabidopsis thaliana]
           gi|332644993|gb|AEE78514.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/73 (65%), Positives = 58/73 (79%)
 Frame = +3

Query: 3   SSIRMGADAYNSVLQALSKNGKFDEALKLFDRMMGEHNHPMKLTVNLGSFNIMAEGFCDQ 182
           S +RM A AYN VL+ALS+NGKFDEALKLFD +  EHN P  L VNLG+FN+M  G+C  
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363

Query: 183 GKFKEAIEVFRKM 221
           GKF+EA+EVFR+M
Sbjct: 364 GKFEEAMEVFRQM 376