BLASTX nr result

ID: Cimicifuga21_contig00036455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036455
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]    56   6e-08
emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera]    56   6e-08
emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera]    56   6e-08
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]    56   6e-08
emb|CAN60595.1| hypothetical protein VITISV_015221 [Vitis vinifera]    56   6e-08

>emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]
          Length = 1930

 Score = 55.8 bits (133), Expect(2) = 6e-08
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +2

Query: 179 FGIFVQSLPTRYLGFPLGACYKRVDVWNPIIDPFDKKLGGWKRSLLS 319
           FG  V SLP+ YLG PLGA +K   VW+ + D F K+LG WKR  LS
Sbjct: 413 FGCKVGSLPSTYLGMPLGASFKSTSVWDGVEDRFRKRLGMWKRQYLS 459



 Score = 25.8 bits (55), Expect(2) = 6e-08
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 111 INLSKLSLFVVGEVLNIMDLASILEYSCK 197
           INL K  L  VG V N+ DLA   E+ CK
Sbjct: 390 INLDKSELIPVGRVENMDDLA--WEFGCK 416


>emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera]
          Length = 1742

 Score = 55.8 bits (133), Expect(2) = 6e-08
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +2

Query: 179  FGIFVQSLPTRYLGFPLGACYKRVDVWNPIIDPFDKKLGGWKRSLLS 319
            FG  V SLP+ YLG PLGA +K   VW+ + D F K+LG WKR  LS
Sbjct: 1144 FGCKVGSLPSTYLGMPLGASFKSTSVWDGVEDRFRKRLGMWKRQYLS 1190



 Score = 25.8 bits (55), Expect(2) = 6e-08
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 111  INLSKLSLFVVGEVLNIMDLASILEYSCK 197
            INL K  L  VG V N+ DLA   E+ CK
Sbjct: 1121 INLDKSELIPVGRVENMDDLA--WEFGCK 1147


>emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera]
          Length = 1177

 Score = 55.8 bits (133), Expect(2) = 6e-08
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +2

Query: 179 FGIFVQSLPTRYLGFPLGACYKRVDVWNPIIDPFDKKLGGWKRSLLS 319
           FG  V SLP+ YLG PLGA +K   VW+ + D F K+LG WKR  LS
Sbjct: 569 FGCKVGSLPSTYLGMPLGASFKSTSVWDGVEDRFRKRLGMWKRQYLS 615



 Score = 25.8 bits (55), Expect(2) = 6e-08
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 111 INLSKLSLFVVGEVLNIMDLASILEYSCK 197
           INL K  L  VG V N+ DLA   E+ CK
Sbjct: 546 INLDKSELIPVGRVENMDDLA--WEFGCK 572


>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
          Length = 945

 Score = 55.8 bits (133), Expect(2) = 6e-08
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +2

Query: 179 FGIFVQSLPTRYLGFPLGACYKRVDVWNPIIDPFDKKLGGWKRSLLS 319
           FG  V SLP+ YLG PLGA +K   VW+ + D F K+LG WKR  LS
Sbjct: 474 FGCKVGSLPSTYLGMPLGASFKSTSVWDGVEDRFRKRLGMWKRQYLS 520



 Score = 25.8 bits (55), Expect(2) = 6e-08
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 111 INLSKLSLFVVGEVLNIMDLASILEYSCK 197
           INL K  L  VG V N+ DLA   E+ CK
Sbjct: 451 INLDKSELIPVGRVENMDDLA--WEFGCK 477


>emb|CAN60595.1| hypothetical protein VITISV_015221 [Vitis vinifera]
          Length = 849

 Score = 55.8 bits (133), Expect(2) = 6e-08
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +2

Query: 179 FGIFVQSLPTRYLGFPLGACYKRVDVWNPIIDPFDKKLGGWKRSLLS 319
           FG  V SLP+ YLG PLGA +K   VW+ + D F K+LG WKR  LS
Sbjct: 378 FGCKVGSLPSTYLGMPLGASFKSTSVWDGVEDRFRKRLGMWKRQYLS 424



 Score = 25.8 bits (55), Expect(2) = 6e-08
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 111 INLSKLSLFVVGEVLNIMDLASILEYSCK 197
           INL K  L  VG V N+ DLA   E+ CK
Sbjct: 355 INLDKSELIPVGRVENMDDLA--WEFGCK 381


Top