BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036431
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...   201   4e-50
emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]   201   4e-50
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40

>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score =  201 bits (512), Expect = 4e-50
 Identities = 92/140 (65%), Positives = 117/140 (83%)
 Frame = +2

Query: 5    KSGVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIV 184
            K G+D NVYVQN+MIHFYGSC+ +  ARR+FD MS+RTVVSWNA+++ CV+N  L++S  
Sbjct: 788  KHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFG 847

Query: 185  LFARMIACGYEPDETTMVILLSACAELGNLSLGRWVHCQVIEKGLVINCKLGTSLVDMYA 364
            LF +M   G++PDETTMVILLSAC+ELGNLS GRWVH QVIEKG+V+NC+LGT+LVDMYA
Sbjct: 848  LFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYA 907

Query: 365  KCGMIEDSFEVFSKMPEKNV 424
            KCG + ++  VF +M E+NV
Sbjct: 908  KCGAVCEASLVFHRMLERNV 927



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/117 (29%), Positives = 55/117 (47%)
 Frame = +2

Query: 80   HARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIVLFARMIACGYEPDETTMVILLSACA 259
            HAR +        V SWN ++          E+I  +  M + G  PD+ T  ILL ACA
Sbjct: 712  HARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACA 771

Query: 260  ELGNLSLGRWVHCQVIEKGLVINCKLGTSLVDMYAKCGMIEDSFEVFSKMPEKNVVS 430
             +   + GR +   V++ GL  N  +  +++  Y  C  I D+  +F +M  + VVS
Sbjct: 772  AISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVS 828



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
 Frame = +2

Query: 5    KSGVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIV 184
            + G+  N  +  +++  Y  C  VC A  VF  M  R V +W+A++    ++    E++ 
Sbjct: 889  EKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALE 948

Query: 185  LFARMIACGYEPDETTMVILLSACAELGNLSLG-RWVHCQVIEKGLVINCKLGTSLVDMY 361
            LF +M      P+  T + +L AC+  G +  G R+ H      G+        ++VD+ 
Sbjct: 949  LFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDIL 1008

Query: 362  AKCGMIEDSFEVFSKMP 412
            ++ G +++++     MP
Sbjct: 1009 SRAGRLKEAYNFILNMP 1025


>emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
          Length = 505

 Score =  201 bits (512), Expect = 4e-50
 Identities = 92/140 (65%), Positives = 117/140 (83%)
 Frame = +2

Query: 5   KSGVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIV 184
           K G+D NVYVQN+MIHFYGSC+ +  ARR+FD MS+RTVVSWNA+++ CV+N  L++S  
Sbjct: 147 KHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFG 206

Query: 185 LFARMIACGYEPDETTMVILLSACAELGNLSLGRWVHCQVIEKGLVINCKLGTSLVDMYA 364
           LF +M   G++PDETTMVILLSAC+ELGNLS GRWVH QVIEKG+V+NC+LGT+LVDMYA
Sbjct: 207 LFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYA 266

Query: 365 KCGMIEDSFEVFSKMPEKNV 424
           KCG + ++  VF +M E+NV
Sbjct: 267 KCGAVCEASLVFHRMLERNV 286



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/117 (29%), Positives = 55/117 (47%)
 Frame = +2

Query: 80  HARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIVLFARMIACGYEPDETTMVILLSACA 259
           HAR +        V SWN ++          E+I  +  M + G  PD+ T  ILL ACA
Sbjct: 71  HARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACA 130

Query: 260 ELGNLSLGRWVHCQVIEKGLVINCKLGTSLVDMYAKCGMIEDSFEVFSKMPEKNVVS 430
            +   + GR +   V++ GL  N  +  +++  Y  C  I D+  +F +M  + VVS
Sbjct: 131 XISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVS 187



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
 Frame = +2

Query: 5   KSGVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIV 184
           + G+  N  +  +++  Y  C  VC A  VF  M  R V +W+A++    ++    E++ 
Sbjct: 248 EKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALE 307

Query: 185 LFARMIACGYEPDETTMVILLSACAELGNLSLG-RWVHCQVIEKGLVINCKLGTSLVDMY 361
           LF +M      P+  T + +L AC+  G +  G R+ H      G+        ++VD+ 
Sbjct: 308 LFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDIL 367

Query: 362 AKCGMIEDSFEVFSKMP 412
           ++ G +++++     MP
Sbjct: 368 SRAGRLKEAYNFILNMP 384


>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score =  173 bits (439), Expect = 1e-41
 Identities = 81/140 (57%), Positives = 111/140 (79%)
 Frame = +2

Query: 5   KSGVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIV 184
           K G+D +VYV+N++I+FYGSC+ +  AR+VFD M+ RT+VSWNA++T CVEN   DE+I 
Sbjct: 159 KCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAID 218

Query: 185 LFARMIACGYEPDETTMVILLSACAELGNLSLGRWVHCQVIEKGLVINCKLGTSLVDMYA 364
            F +M   G+EPDETTMV++LSACAELGNLSLGRWVH QV+ +G+V+N +LGT+ VDMYA
Sbjct: 219 YFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYA 278

Query: 365 KCGMIEDSFEVFSKMPEKNV 424
           K G +  +  VF+ + +K+V
Sbjct: 279 KSGDVGCARHVFNCLKQKSV 298



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/136 (23%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
 Frame = +2

Query: 11  GVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIVLF 190
           G+  NV +  + +  Y    +V  AR VF+ +  ++V +W+A++    ++   +E+I LF
Sbjct: 262 GMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAIELF 321

Query: 191 ARMIACGYEPDETTMVILLSACAELGNLSLGRWVHCQVIEKGLVINCKL--GTSLVDMYA 364
             M++    P+  T + +L AC+  G +    + +  ++E+   I   +    S+VD+  
Sbjct: 322 TNMMSSPIVPNHVTFIGVLCACSHAGLVDKS-YHYFNLMERVYGIKPMMIHYGSMVDVLG 380

Query: 365 KCGMIEDSFEVFSKMP 412
           + G +++++E+   MP
Sbjct: 381 RAGQVKEAYELIMSMP 396


>ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score =  173 bits (438), Expect = 1e-41
 Identities = 81/140 (57%), Positives = 111/140 (79%)
 Frame = +2

Query: 5   KSGVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIV 184
           K G+D +VYV+N++I+FYGSC+ +  AR+VFD M+ RT+VSWNA++T CVEN   DE+I 
Sbjct: 159 KCGLDLDVYVRNTLINFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAID 218

Query: 185 LFARMIACGYEPDETTMVILLSACAELGNLSLGRWVHCQVIEKGLVINCKLGTSLVDMYA 364
            F +M   G+EPDETTMV++LSACAELGNLSLGRWVH QV+ +G+V+N +LGT+ VDMYA
Sbjct: 219 YFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYA 278

Query: 365 KCGMIEDSFEVFSKMPEKNV 424
           K G +  +  VF+ + +K+V
Sbjct: 279 KSGDVGCARHVFNCLKQKSV 298



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/136 (23%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
 Frame = +2

Query: 11  GVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESIVLF 190
           G+  NV +  + +  Y    +V  AR VF+ +  ++V +W+A++    ++   +E+I LF
Sbjct: 262 GMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAIELF 321

Query: 191 ARMIACGYEPDETTMVILLSACAELGNLSLGRWVHCQVIEKGLVINCKL--GTSLVDMYA 364
             M +    P+  T + +L AC+  G +    + +  ++E+   I   +    S+VD+  
Sbjct: 322 TNMTSSPIVPNHVTFIGVLCACSHAGLVDKS-YHYFNLMERVYGIKPMMIHYGSMVDVLG 380

Query: 365 KCGMIEDSFEVFSKMP 412
           + G +++++E+   MP
Sbjct: 381 RAGQVKEAYELIMSMP 396


>ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|222867061|gb|EEF04192.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  169 bits (429), Expect = 2e-40
 Identities = 76/141 (53%), Positives = 109/141 (77%)
 Frame = +2

Query: 2   WKSGVDSNVYVQNSMIHFYGSCREVCHARRVFDVMSFRTVVSWNAIVTVCVENSMLDESI 181
           +K G+D +VYV N+++H YGSC+ +  A +VFD M  R++VSWN+++T CV+N  L ++I
Sbjct: 146 FKFGLDCDVYVNNNLVHLYGSCKRIWDACKVFDEMPVRSIVSWNSVITACVQNLWLGDAI 205

Query: 182 VLFARMIACGYEPDETTMVILLSACAELGNLSLGRWVHCQVIEKGLVINCKLGTSLVDMY 361
             F +M   G+EP+ETTMVI+LS CA++GNLSLGRW+H QVIE+G+ +NC+LGT+LVDMY
Sbjct: 206 WNFVKMKDFGFEPNETTMVIMLSLCAQIGNLSLGRWIHSQVIERGMTLNCQLGTALVDMY 265

Query: 362 AKCGMIEDSFEVFSKMPEKNV 424
           AK G +  +  VF +M +KNV
Sbjct: 266 AKSGDLGYAKLVFDRMEKKNV 286



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/108 (29%), Positives = 53/108 (49%)
 Frame = +2

Query: 107 SFRTVVSWNAIVTVCVENSMLDESIVLFARMIACGYEPDETTMVILLSACAELGNLSLGR 286
           S  ++  WN ++           +I +F RM   G  P+  T   +L ACA    L  G+
Sbjct: 80  SLDSLPPWNFLIRGYASGDAPKNAIRVFHRMRKEGVGPNNFTFPFVLKACATCLALEEGK 139

Query: 287 WVHCQVIEKGLVINCKLGTSLVDMYAKCGMIEDSFEVFSKMPEKNVVS 430
            VH  + + GL  +  +  +LV +Y  C  I D+ +VF +MP +++VS
Sbjct: 140 QVHADIFKFGLDCDVYVNNNLVHLYGSCKRIWDACKVFDEMPVRSIVS 187