BLASTX nr result

ID: Cimicifuga21_contig00036421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036421
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518524.1| nuclear transport factor, putative [Ricinus ...   191   5e-47
ref|XP_002267081.1| PREDICTED: nuclear transport factor 2 [Vitis...   188   3e-46
ref|XP_002317209.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [...   180   9e-44
ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [...   180   9e-44

>ref|XP_002518524.1| nuclear transport factor, putative [Ricinus communis]
           gi|223542369|gb|EEF43911.1| nuclear transport factor,
           putative [Ricinus communis]
          Length = 125

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/118 (77%), Positives = 104/118 (88%)
 Frame = +1

Query: 1   VGRAFVDHYYLLFDTSRASLSSLYQPTSMLTFEGQKIHGGDDIALKLNQLPFDECKHLIT 180
           VG+AFV+HYY LFD  R+SL+SLY P+SMLTFEGQKI G DDI+ KLN LPFD+CKH I+
Sbjct: 8   VGKAFVNHYYNLFDNDRSSLASLYHPSSMLTFEGQKILGVDDISSKLNNLPFDQCKHAIS 67

Query: 181 TIDCQPSSFTGGILVFVSGNLQLAGEEHQLKFSQMFHLIPTLQGNFFVQNDIFRLNYG 354
           TID QPSSF GGI+VFVSG+LQLAGEEH L+FSQMFHLIP++QG  FVQNDIFRLNYG
Sbjct: 68  TIDTQPSSFAGGIVVFVSGSLQLAGEEHPLRFSQMFHLIPSVQGGLFVQNDIFRLNYG 125


>ref|XP_002267081.1| PREDICTED: nuclear transport factor 2 [Vitis vinifera]
          Length = 125

 Score =  188 bits (478), Expect = 3e-46
 Identities = 87/118 (73%), Positives = 104/118 (88%)
 Frame = +1

Query: 1   VGRAFVDHYYLLFDTSRASLSSLYQPTSMLTFEGQKIHGGDDIALKLNQLPFDECKHLIT 180
           +GRAFVDHYY LFD  R+SL SLY  TSMLTFEG K+ G D+I+ KLN LPFD+C+H+I+
Sbjct: 8   LGRAFVDHYYYLFDNDRSSLPSLYHSTSMLTFEGHKVQGVDEISQKLNLLPFDQCQHVIS 67

Query: 181 TIDCQPSSFTGGILVFVSGNLQLAGEEHQLKFSQMFHLIPTLQGNFFVQNDIFRLNYG 354
           TID QPSSFTGGI+VFVSG+L+L GEEHQL+FSQMFHL+P+ +G+FFVQNDIFRLNYG
Sbjct: 68  TIDSQPSSFTGGIMVFVSGSLKLPGEEHQLRFSQMFHLVPSSEGSFFVQNDIFRLNYG 125


>ref|XP_002317209.1| predicted protein [Populus trichocarpa] gi|222860274|gb|EEE97821.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  182 bits (463), Expect = 2e-44
 Identities = 88/117 (75%), Positives = 99/117 (84%)
 Frame = +1

Query: 1   VGRAFVDHYYLLFDTSRASLSSLYQPTSMLTFEGQKIHGGDDIALKLNQLPFDECKHLIT 180
           VG+AFVDHYY LFD  R+SL+SLYQPTSMLTFEGQKI G +DI+ KLN LPF  CKH+I+
Sbjct: 7   VGKAFVDHYYNLFDNDRSSLASLYQPTSMLTFEGQKIVGVEDISCKLNNLPFGNCKHIIS 66

Query: 181 TIDCQPSSFTGGILVFVSGNLQLAGEEHQLKFSQMFHLIPTLQGNFFVQNDIFRLNY 351
           TID QPS+  GGI+VFVSG+LQL GEEH L+FSQMFHLIPT  G FFVQND FRLNY
Sbjct: 67  TIDSQPSAHGGGIVVFVSGSLQLPGEEHHLRFSQMFHLIPTQDGCFFVQNDFFRLNY 123


>ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  180 bits (457), Expect = 9e-44
 Identities = 84/117 (71%), Positives = 98/117 (83%)
 Frame = +1

Query: 1   VGRAFVDHYYLLFDTSRASLSSLYQPTSMLTFEGQKIHGGDDIALKLNQLPFDECKHLIT 180
           V +AFVDHYY  FD +RA+L +LYQ  SMLTFEGQKI G  +I  KL+ LPF +CKH ++
Sbjct: 56  VAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVS 115

Query: 181 TIDCQPSSFTGGILVFVSGNLQLAGEEHQLKFSQMFHLIPTLQGNFFVQNDIFRLNY 351
           T+DCQPS  TGG+LVFVSGNLQLAGE+H LKFSQMFHL+PT QG+FFVQNDIFRLNY
Sbjct: 116 TVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNY 172


>ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  180 bits (457), Expect = 9e-44
 Identities = 84/117 (71%), Positives = 98/117 (83%)
 Frame = +1

Query: 1   VGRAFVDHYYLLFDTSRASLSSLYQPTSMLTFEGQKIHGGDDIALKLNQLPFDECKHLIT 180
           V +AFVDHYY  FD +RA+L +LYQ  SMLTFEGQKI G  +I  KL+ LPF +CKH ++
Sbjct: 56  VAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVS 115

Query: 181 TIDCQPSSFTGGILVFVSGNLQLAGEEHQLKFSQMFHLIPTLQGNFFVQNDIFRLNY 351
           T+DCQPS  TGG+LVFVSGNLQLAGE+H LKFSQMFHL+PT QG+FFVQNDIFRLNY
Sbjct: 116 TVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNY 172


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