BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036409
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|...    63   3e-08
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...    61   8e-08
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...    61   1e-07
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...    57   1e-06
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...    57   2e-06

>ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|222865638|gb|EEF02769.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1492

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
 Frame = +3

Query: 12   LRKSQSLLRLKQSHNPHVHLAKPKSE---VCIATERTLA-----FVHMPAELLVPIDVST 167
            +   Q LLRLKQSHNPH HL     E   VC + +  +       VHMP ELL+ IDV  
Sbjct: 827  MHPGQPLLRLKQSHNPHNHLVNFNDEGLLVCDSKDGMVGRKQQQHVHMPPELLIKIDVPI 886

Query: 168  GVLKSFYFLPSLIH 209
             V+KS Y +PSL+H
Sbjct: 887  SVVKSIYLMPSLMH 900


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/68 (54%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
 Frame = +3

Query: 24   QSLLRLKQSHNPHVHLAKPKSEVCI------ATERTLAFVHMPAELLVPIDVSTGVLKSF 185
            Q LLRLKQSHNPH  L   K E         A +R    VHMP EL++ +DV  GVLKS 
Sbjct: 964  QPLLRLKQSHNPHNLLVNFKDEGFDKLPSGPAFKRPQMHVHMPPELVLSMDVPKGVLKSS 1023

Query: 186  YFLPSLIH 209
            Y LPSLIH
Sbjct: 1024 YLLPSLIH 1031


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
 Frame = +3

Query: 24  QSLLRLKQSHNPHVHLAKPKSEVCI--------ATERTLAFVHMPAELLVPIDVSTGVLK 179
           Q LLRLKQSHNPH  L   K E           A +R    VHMP EL++ +DV  GVLK
Sbjct: 692 QPLLRLKQSHNPHNLLVNFKDEGNTSDKLPSGPAFKRPQMHVHMPPELVLSMDVPKGVLK 751

Query: 180 SFYFLPSLIH 209
           S Y LPSLIH
Sbjct: 752 SSYLLPSLIH 761


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
 Frame = +3

Query: 24   QSLLRLKQSHNPHVHLAK--------PKSEVCIATERTLAFVHMPAELLVPIDVSTGVLK 179
            Q L+ LKQSHNPH  L            S+  +  E+    VHMP ELL+ +DV   VLK
Sbjct: 971  QPLMLLKQSHNPHNLLVNFNDEGVSAKASQAGVVNEKPRFHVHMPPELLLVLDVPVSVLK 1030

Query: 180  SFYFLPSLIH 209
            S Y LPSL+H
Sbjct: 1031 SLYLLPSLMH 1040


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/68 (51%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
 Frame = +3

Query: 24   QSLLRLKQSHNPHVHLAKPKSEVCIAT------ERTLAFVHMPAELLVPIDVSTGVLKSF 185
            Q LL LKQSHN H  L     E  + T      E+    VHMP ELLV I+V   VLKS 
Sbjct: 969  QPLLLLKQSHNAHNLLVNFNDEDALQTGQKMLNEKAQTHVHMPPELLVSIEVPITVLKSS 1028

Query: 186  YFLPSLIH 209
            Y LPSLIH
Sbjct: 1029 YLLPSLIH 1036