BLASTX nr result

ID: Cimicifuga21_contig00036405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036405
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629672.1| F-box family protein [Medicago truncatula] g...    68   9e-10
emb|CAE04219.2| OSJNBa0064D20.3 [Oryza sativa Japonica Group]          64   2e-08
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...    64   2e-08
emb|CAE02505.1| P0076O17.3 [Oryza sativa Japonica Group] gi|1255...    64   2e-08
ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g...    63   2e-08

>ref|XP_003629672.1| F-box family protein [Medicago truncatula]
           gi|355523694|gb|AET04148.1| F-box family protein
           [Medicago truncatula]
          Length = 709

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = +1

Query: 193 MSNNDNDSAADRISYLADDLLHQILSLLDMKEVVHTCLLSKRWKHLWKSVPNL 351
           ++  DND   DRIS L D +L  ILSLL  K+VV TC+LSKRWKHLWK +P L
Sbjct: 15  IARRDNDENHDRISDLPDCILLHILSLLHSKQVVQTCVLSKRWKHLWKRIPTL 67


>emb|CAE04219.2| OSJNBa0064D20.3 [Oryza sativa Japonica Group]
          Length = 486

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/47 (57%), Positives = 37/47 (78%)
 Frame = +1

Query: 214 SAADRISYLADDLLHQILSLLDMKEVVHTCLLSKRWKHLWKSVPNLN 354
           +A DR+S L D LLH ++S L  +++V TC+LSKRW HLW+SVP+LN
Sbjct: 17  AAVDRLSSLPDALLHAVMSSLPARQMVQTCVLSKRWVHLWRSVPSLN 63


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +1

Query: 199 NNDNDSAADRISYLADDLLHQILSLLDMKEVVHTCLLSKRWKHLWKSVPNL 351
           N  N+ + DR+S L D ++  ILS L+ K VV TC+LSKRW+HLWK +P L
Sbjct: 27  NQSNEESEDRLSDLPDGIILHILSFLNTKHVVRTCVLSKRWRHLWKRIPTL 77


>emb|CAE02505.1| P0076O17.3 [Oryza sativa Japonica Group]
           gi|125548422|gb|EAY94244.1| hypothetical protein
           OsI_16015 [Oryza sativa Indica Group]
           gi|125591640|gb|EAZ31990.1| hypothetical protein
           OsJ_16166 [Oryza sativa Japonica Group]
          Length = 466

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/47 (57%), Positives = 37/47 (78%)
 Frame = +1

Query: 214 SAADRISYLADDLLHQILSLLDMKEVVHTCLLSKRWKHLWKSVPNLN 354
           +A DR+S L D LLH ++S L  +++V TC+LSKRW HLW+SVP+LN
Sbjct: 17  AAVDRLSSLPDALLHAVMSSLPARQMVQTCVLSKRWVHLWRSVPSLN 63


>ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g26030-like [Cucumis
           sativus]
          Length = 365

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +1

Query: 223 DRISYLADDLLHQILSLLDMKEVVHTCLLSKRWKHLWKSVPNLN 354
           DRIS L D LLH+ILS L+ K VV TC+LSKRWK LW  +P LN
Sbjct: 12  DRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLN 55


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