BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036392
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...    96   9e-18
emb|CBI26347.3| unnamed protein product [Vitis vinifera]               96   9e-18
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...    91   2e-16
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    81   3e-13
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13

>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
 Frame = -1

Query: 492 RIATMDVCCLHIVVSTKTPPLIGVSGG----VGKMSKLREQKFVENPNGASRSISKVYRK 325
           ++  +D  C   V+S +  P IG S      V  + K R QK  E+PNG  +  S+V R+
Sbjct: 4   KLHCLDTNCFQ-VLSARGSPNIGDSASSSDKVEFIKKRRVQKVPESPNGGVKRFSRVCRQ 62

Query: 324 SQN-KRSDDVVKPSLECPNSVKNPIQEQSRVVGSRG-VGSKSNGVALSKWVSQNKNKEGE 151
           + + +RS    KP L     VK+P ++Q R  G  G   +K  GV   +    N   E  
Sbjct: 63  THHDRRSGASQKPGLNQHGFVKDPERKQRRHSGGDGRTINKRGGVVGFRSGDANDLVE-- 120

Query: 150 NFSEGKKETKYLSKWLSYGGCLPLILQALDTIEDLDEALKPWEKTLNNKE 1
                K  T   +KWLSYGGC+P IL+AL+T++DLDEAL PWE++L+NKE
Sbjct: 121 -----KVSTNCSTKWLSYGGCIPSILRALETVKDLDEALSPWEESLSNKE 165


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
 Frame = -1

Query: 492 RIATMDVCCLHIVVSTKTPPLIGVSGG----VGKMSKLREQKFVENPNGASRSISKVYRK 325
           ++  +D  C   V+S +  P IG S      V  + K R QK  E+PNG  +  S+V R+
Sbjct: 4   KLHCLDTNCFQ-VLSARGSPNIGDSASSSDKVEFIKKRRVQKVPESPNGGVKRFSRVCRQ 62

Query: 324 SQN-KRSDDVVKPSLECPNSVKNPIQEQSRVVGSRG-VGSKSNGVALSKWVSQNKNKEGE 151
           + + +RS    KP L     VK+P ++Q R  G  G   +K  GV   +    N   E  
Sbjct: 63  THHDRRSGASQKPGLNQHGFVKDPERKQRRHSGGDGRTINKRGGVVGFRSGDANDLVE-- 120

Query: 150 NFSEGKKETKYLSKWLSYGGCLPLILQALDTIEDLDEALKPWEKTLNNKE 1
                K  T   +KWLSYGGC+P IL+AL+T++DLDEAL PWE++L+NKE
Sbjct: 121 -----KVSTNCSTKWLSYGGCIPSILRALETVKDLDEALSPWEESLSNKE 165


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 12/162 (7%)
 Frame = -1

Query: 450 STKTPPLIGVS------------GGVGKMSKLREQKFVENPNGASRSISKVYRKSQNKRS 307
           ST+T P +GVS              +  + KLRE++ +E  NG  +    ++++S++K +
Sbjct: 18  STRTLPNVGVSVSTNTGISVSPLENIEPVKKLREKRLLETSNGTVKKFGVIHKQSRDKAN 77

Query: 306 DDVVKPSLECPNSVKNPIQEQSRVVGSRGVGSKSNGVALSKWVSQNKNKEGENFSEGKKE 127
           D   K         +NP ++Q      R +G  +     +K +    ++   N S  K  
Sbjct: 78  DSAHKNGFGKQALEQNPDRQQ------RKMGRNNYKTMNNKSLGVKFHRINGNDSVDKVR 131

Query: 126 TKYLSKWLSYGGCLPLILQALDTIEDLDEALKPWEKTLNNKE 1
           TK  +KW++YGG +P IL+AL+TI++LDEALKPWE TL+NKE
Sbjct: 132 TKCSTKWVNYGGSIPSILEALETIKNLDEALKPWEDTLSNKE 173


>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 62/168 (36%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
 Frame = -1

Query: 480 MDVCCLHIVVSTKTPPLIGVSGG-----VGKMSKLREQKFVENPNGASRSISKVYRKSQN 316
           +D  C+H + ST   P++G S       V    K  +    E PN   + +  V +KS N
Sbjct: 4   LDTPCVHGLGSTLRSPIVGASVSPPDNLVPISKKPNDWWIPECPNRVLKKVGGV-QKSTN 62

Query: 315 KRSDDVVKPSLECPNSVKN-PIQEQSR-VVGSRGVGSKSNGVALSKWVSQNKNKEGE-NF 145
                  +   +  N ++    Q+++R +VG R VG K  G              G+ N 
Sbjct: 63  DNGGRRQEIRFKKANKMEERETQKRNRHLVGHRVVGKKDAG--------------GDGNG 108

Query: 144 SEGKKETKYLSKWLSYGGCLPLILQALDTIEDLDEALKPWEKTLNNKE 1
           S  K   K  +KWLSYGGC+P ILQALD I DLDEALKPW+  LNNKE
Sbjct: 109 SVEKVHAKCSTKWLSYGGCIPAILQALDEISDLDEALKPWKDKLNNKE 156


>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Cucumis sativus]
          Length = 858

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 60/167 (35%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
 Frame = -1

Query: 480 MDVCCLHIVVSTKTPPLIGVSGG-----VGKMSKLREQKFVENPNGASRSISKVYRKSQN 316
           +D  C+H + ST   P++G S       V    K  +    E PN   + +  V +KS N
Sbjct: 4   LDTPCVHGLGSTLRSPIVGASVSPPDNLVPISKKPNDWWIPECPNRVLKKVGGV-QKSTN 62

Query: 315 KRSDDVVKPSLECPNSVKN-PIQEQSRVVGSRGVGSKSNGVALSKWVSQNKNKEGE-NFS 142
                  +   +  N ++    Q+++R +G R V  K  G              G+ N S
Sbjct: 63  DNGGRRQEIRFKKANKMEERETQKRNRHLGHRVVVKKDAG--------------GDGNGS 108

Query: 141 EGKKETKYLSKWLSYGGCLPLILQALDTIEDLDEALKPWEKTLNNKE 1
             K   K  +KWLSYGGC+P ILQALD I DLDEALKPW+  LNNKE
Sbjct: 109 VEKVHAKCSTKWLSYGGCIPAILQALDEISDLDEALKPWKDKLNNKE 155