BLASTX nr result

ID: Cimicifuga21_contig00036378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036378
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31361.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s...   118   4e-25
emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera]   118   4e-25
ref|XP_002526400.1| queuine tRNA-ribosyltransferase, putative [R...   116   2e-24
ref|XP_002325954.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>emb|CBI31361.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = -1

Query: 220 LHKMVGLPNYCFAAAPRDSMLCLPVCESSNKLGASFESPCGRRLIRSAEYIEMISSLKPN 41
           LH+M+GL  Y FAA PRDS++CLP C+S+NK+GASFE+P GRRLI+  EY+EMISS+KP+
Sbjct: 82  LHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETPSGRRLIKPVEYMEMISSMKPS 141

Query: 40  LWATLADEVPAWV 2
           LWATLADEVPAWV
Sbjct: 142 LWATLADEVPAWV 154


>ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis
           vinifera]
          Length = 399

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = -1

Query: 220 LHKMVGLPNYCFAAAPRDSMLCLPVCESSNKLGASFESPCGRRLIRSAEYIEMISSLKPN 41
           LH+M+GL  Y FAA PRDS++CLP C+S+NK+GASFE+P GRRLI+  EY+EMISS+KP+
Sbjct: 82  LHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETPSGRRLIKPVEYMEMISSMKPS 141

Query: 40  LWATLADEVPAWV 2
           LWATLADEVPAWV
Sbjct: 142 LWATLADEVPAWV 154


>emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera]
          Length = 383

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = -1

Query: 220 LHKMVGLPNYCFAAAPRDSMLCLPVCESSNKLGASFESPCGRRLIRSAEYIEMISSLKPN 41
           LH+M+GL  Y FAA PRDS++CLP C+S+NK+GASFE+P GRRLI+  EY+EMISS+KP+
Sbjct: 82  LHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETPSGRRLIKPVEYMEMISSMKPS 141

Query: 40  LWATLADEVPAWV 2
           LWATLADEVPAWV
Sbjct: 142 LWATLADEVPAWV 154


>ref|XP_002526400.1| queuine tRNA-ribosyltransferase, putative [Ricinus communis]
           gi|223534262|gb|EEF35976.1| queuine
           tRNA-ribosyltransferase, putative [Ricinus communis]
          Length = 406

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = -1

Query: 220 LHKMVGLPNYCFAAAPRDSMLCLPVCESSNKLGASFESPCGRRLIRSAEYIEMISSLKPN 41
           LH+MVGL +  F A PRDS+ CLP C S+NK GASFE+PCGRRLI+ +EY++MISS++PN
Sbjct: 117 LHQMVGLHDSAFVAVPRDSIQCLPECGSTNKFGASFETPCGRRLIKPSEYLQMISSIRPN 176

Query: 40  LWATLADEVPAWV 2
           +WATLADEVPAWV
Sbjct: 177 IWATLADEVPAWV 189


>ref|XP_002325954.1| predicted protein [Populus trichocarpa] gi|222862829|gb|EEF00336.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/73 (67%), Positives = 61/73 (83%)
 Frame = -1

Query: 220 LHKMVGLPNYCFAAAPRDSMLCLPVCESSNKLGASFESPCGRRLIRSAEYIEMISSLKPN 41
           +HKM+GL ++  AA  RDS+ CLP   ++NKLGASFE+PCGR LI+ AEY+ +ISSL+PN
Sbjct: 85  IHKMIGLHDFGLAAVARDSIQCLPESSATNKLGASFETPCGRLLIKPAEYMGIISSLRPN 144

Query: 40  LWATLADEVPAWV 2
           LWATLADEVPAWV
Sbjct: 145 LWATLADEVPAWV 157


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