BLASTX nr result

ID: Cimicifuga21_contig00036305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036305
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313943.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002522045.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002300297.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
emb|CBI25075.3| unnamed protein product [Vitis vinifera]               84   9e-15
emb|CAN68159.1| hypothetical protein VITISV_006519 [Vitis vinifera]    84   9e-15

>ref|XP_002313943.1| predicted protein [Populus trichocarpa] gi|222850351|gb|EEE87898.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/93 (54%), Positives = 69/93 (74%)
 Frame = -1

Query: 281 MSAPAKPSKPRVCRFTTMTSISQKMANNKVKVRSVSKINFTPTVKPNESSLAAKSLTTPR 102
           + APAK SKPRV R   ++SIS+KM + KVKV+ ++K N TP V+  +SS+A+K+LTTPR
Sbjct: 36  IQAPAKSSKPRVSRLALISSISKKMVDQKVKVKPLAKRNATPNVREKQSSVASKALTTPR 95

Query: 101 VKKSIQSSDHFRSVQNPKRTDAVAKSKVVAKTL 3
            KK + + D FRSV+NPK  D +A S+VVAK L
Sbjct: 96  NKKRLSNPDAFRSVRNPKAMD-IANSRVVAKAL 127


>ref|XP_002522045.1| conserved hypothetical protein [Ricinus communis]
           gi|223538644|gb|EEF40245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 694

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = -1

Query: 284 PMSAPAKPSKPRVCRFTTMTSISQKMANNKVKVRSVSKINFTPTVKPNESSLAAKSLTTP 105
           P + PAKPSKPRV R   ++SIS+++ + KVKV+ +SK N     K  + S+ AK+LTTP
Sbjct: 101 PRTVPAKPSKPRVTRLALISSISKRIVDPKVKVKPISKQNAMLNAKAKQPSVIAKALTTP 160

Query: 104 RVKKSIQSSDHFRSVQNPKRT-DAVAKSKVVAKTL 3
           R KK + + D FRSV+NPK T  A++K+++VAK L
Sbjct: 161 RTKKQLSNLDAFRSVRNPKTTATAMSKNRLVAKAL 195


>ref|XP_002300297.1| predicted protein [Populus trichocarpa] gi|222847555|gb|EEE85102.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/101 (49%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
 Frame = -1

Query: 302 SAYMNYPMSAPAKPSKPRVCRFTTMTSISQKMANNKVKVRSVSKINFTPTVKPNESSLAA 123
           SA +  P + PAK SKPRV R   ++SIS++M + KV+V+S++K N TP V+  + S+ +
Sbjct: 90  SANIKCPQTVPAKSSKPRVSRLALISSISKRMVDPKVRVKSLAKQNATPNVRAKQ-SVVS 148

Query: 122 KSLTTPRVKKSIQSSDHFRSVQNPKRTD-AVAKSKVVAKTL 3
           K+LTTPR KK + + D F SV+NPK T  AV  S+VVAK L
Sbjct: 149 KALTTPRNKKRLSNPDAFCSVRNPKATAVAVPNSRVVAKAL 189


>emb|CBI25075.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = -1

Query: 311 QVPSAYMNYPMSAPAKPSKPRVCRFTTMTSISQKMANNKVKVRSVSKINFTPTVKPNESS 132
           + PS  M  P+SAPAKPSK R+ R   ++S SQK+   KVK         TP  +  +SS
Sbjct: 84  KAPSTTMKCPLSAPAKPSKSRLSRLAVISSFSQKITEAKVK-------GSTPKPEVKQSS 136

Query: 131 LAAKSLTTPRVKKSIQSSDHFRSVQNPKRTD-AVAKSKVVAKTL 3
           +  K+LTTPR KK  Q+ + FRSV+NPK T  AV K++VVAK L
Sbjct: 137 VVVKALTTPRNKKYPQNRNSFRSVRNPKATTIAVPKNRVVAKAL 180


>emb|CAN68159.1| hypothetical protein VITISV_006519 [Vitis vinifera]
          Length = 789

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = -1

Query: 311 QVPSAYMNYPMSAPAKPSKPRVCRFTTMTSISQKMANNKVKVRSVSKINFTPTVKPNESS 132
           + PS  M  P+SAPAKPSK R+ R   ++S SQK+   KVK         TP  +  +SS
Sbjct: 84  KAPSTTMKCPLSAPAKPSKSRLSRLAVISSFSQKITEAKVK-------GSTPKPEVKQSS 136

Query: 131 LAAKSLTTPRVKKSIQSSDHFRSVQNPKRTD-AVAKSKVVAKTL 3
           +  K+LTTPR KK  Q+ + FRSV+NPK T  AV K++VVAK L
Sbjct: 137 VVVKALTTPRNKKYPQNRNSFRSVRNPKATTIAVPKNRVVAKAL 180


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