BLASTX nr result

ID: Cimicifuga21_contig00036299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036299
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273656.1| PREDICTED: DNA replication complex GINS prot...   118   6e-25
ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [S...   114   8e-24
gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japo...   114   1e-23
gb|EEC70314.1| hypothetical protein OsI_01171 [Oryza sativa Indi...   114   1e-23
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g...   114   1e-23

>ref|XP_002273656.1| PREDICTED: DNA replication complex GINS protein PSF2 [Vitis
           vinifera] gi|297737295|emb|CBI26496.3| unnamed protein
           product [Vitis vinifera]
          Length = 210

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/73 (80%), Positives = 62/73 (84%)
 Frame = -1

Query: 428 EDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKHDSPQMIHQ 249
           EDIR+VRFHKVE GL+TI  RTH VKLKNLSAME NIVRPF VRALQAFYKHDSP+MI Q
Sbjct: 129 EDIRNVRFHKVETGLETIHERTHAVKLKNLSAMEANIVRPFVVRALQAFYKHDSPEMIPQ 188

Query: 248 PDATANRRPQQAD 210
           PD TA RR Q AD
Sbjct: 189 PDTTAIRRRQVAD 201


>ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [Sorghum bicolor]
           gi|241926822|gb|EER99966.1| hypothetical protein
           SORBIDRAFT_02g043990 [Sorghum bicolor]
          Length = 211

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/73 (78%), Positives = 59/73 (80%)
 Frame = -1

Query: 428 EDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKHDSPQMIHQ 249
           EDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKHDSPQMI Q
Sbjct: 129 EDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQ 188

Query: 248 PDATANRRPQQAD 210
            D T +R     D
Sbjct: 189 ADNTGSRATPVTD 201


>gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japonica Group]
          Length = 224

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/67 (83%), Positives = 58/67 (86%)
 Frame = -1

Query: 428 EDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKHDSPQMIHQ 249
           EDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKHDSPQMI Q
Sbjct: 142 EDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQ 201

Query: 248 PDATANR 228
            D T +R
Sbjct: 202 ADNTGSR 208


>gb|EEC70314.1| hypothetical protein OsI_01171 [Oryza sativa Indica Group]
          Length = 224

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/67 (83%), Positives = 58/67 (86%)
 Frame = -1

Query: 428 EDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKHDSPQMIHQ 249
           EDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKHDSPQMI Q
Sbjct: 142 EDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQ 201

Query: 248 PDATANR 228
            D T +R
Sbjct: 202 ADNTGSR 208


>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
           gi|11320850|dbj|BAB18333.1| putative DNA replication
           complex GINS protein PSF2 [Oryza sativa Japonica Group]
           gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
           Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704757|dbj|BAG94785.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 211

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/67 (83%), Positives = 58/67 (86%)
 Frame = -1

Query: 428 EDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKHDSPQMIHQ 249
           EDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKHDSPQMI Q
Sbjct: 129 EDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQ 188

Query: 248 PDATANR 228
            D T +R
Sbjct: 189 ADNTGSR 195


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