BLASTX nr result

ID: Cimicifuga21_contig00036291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036291
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81981.1| hypothetical protein VITISV_042629 [Vitis vinifera]   139   2e-31
ref|XP_002512377.1| conserved hypothetical protein [Ricinus comm...   138   4e-31
ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002284730.2| PREDICTED: uncharacterized protein LOC100259...   135   3e-30
emb|CBI36769.3| unnamed protein product [Vitis vinifera]              133   1e-29

>emb|CAN81981.1| hypothetical protein VITISV_042629 [Vitis vinifera]
          Length = 1239

 Score =  139 bits (351), Expect = 2e-31
 Identities = 77/122 (63%), Positives = 92/122 (75%), Gaps = 7/122 (5%)
 Frame = +3

Query: 3    SLQHKFCKTRSPVITRTQQTPHKFLIKSPPSHSKFQVKIKSPPVSLSPSKANILNKK-CP 179
            S Q KFC+TRSPV+ +T++ PHKFLIKSPPS SK QVKIK+ PVS+SP+++  L KK  P
Sbjct: 1118 SHQQKFCRTRSPVLAKTRELPHKFLIKSPPSASKSQVKIKNLPVSISPTRSTALGKKSSP 1177

Query: 180  KVSTATKLRRSLSPARLANRLVSPLKNRMSIQMAGG--FMSGLKQRPSNS----ARSSVR 341
            KVS A K RRS SP+RLANRLVSPLKNR  +Q + G   MSGLKQRP++S     R SV 
Sbjct: 1178 KVSAAVKFRRSFSPSRLANRLVSPLKNRKCVQKSDGLMMMSGLKQRPASSLVMPTRLSVE 1237

Query: 342  RI 347
            RI
Sbjct: 1238 RI 1239


>ref|XP_002512377.1| conserved hypothetical protein [Ricinus communis]
           gi|223548338|gb|EEF49829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 359

 Score =  138 bits (348), Expect = 4e-31
 Identities = 78/111 (70%), Positives = 89/111 (80%), Gaps = 4/111 (3%)
 Frame = +3

Query: 9   QHKFCKTRSPVITRTQQT-PHKFLIKSPPSHSKFQVKIKSPPV-SLSPSK-ANILNKKCP 179
           Q KFC+TRSPVI+ T+QT PHKFLIKSPPS SKFQVKIKS PV S+SP++ AN   K  P
Sbjct: 242 QQKFCRTRSPVISTTKQTTPHKFLIKSPPSASKFQVKIKSSPVVSISPTRPANFSKKLSP 301

Query: 180 KVSTATKLRRSLSPARLANRLVSPLKNR-MSIQMAGGFMSGLKQRPSNSAR 329
           KVSTA+KLRRS SP+RLANRLVSPLK R  S+Q   G MSGLKQRP++  R
Sbjct: 302 KVSTASKLRRSFSPSRLANRLVSPLKTRKSSVQKTDGLMSGLKQRPASMPR 352


>ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|222838278|gb|EEE76643.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  135 bits (341), Expect = 3e-30
 Identities = 76/117 (64%), Positives = 89/117 (76%), Gaps = 4/117 (3%)
 Frame = +3

Query: 9   QHKFCKTRSPVITRT--QQTPHKFLIKSPPSHSKFQVKIKSPPV-SLSPSKANILNKKCP 179
           Q KFCKTRSPVI R   Q TPHKFLIKSPPS SKFQVKIK+PPV SLSP++   L+KK P
Sbjct: 241 QQKFCKTRSPVIARNKKQTTPHKFLIKSPPSGSKFQVKIKNPPVLSLSPTRPTNLSKKSP 300

Query: 180 KVSTATKLRRSLSPARLANRLVSPLKNRMSIQMAGGFMSGLKQRP-SNSARSSVRRI 347
           K STA+K RRS SP+RLA++L+SPLK R  +Q +   MSGLKQRP +   R S+ RI
Sbjct: 301 KSSTASKFRRSFSPSRLAHKLMSPLKGRKIVQKSDVLMSGLKQRPIATPRRFSLGRI 357


>ref|XP_002284730.2| PREDICTED: uncharacterized protein LOC100259649 [Vitis vinifera]
          Length = 357

 Score =  135 bits (340), Expect = 3e-30
 Identities = 75/123 (60%), Positives = 91/123 (73%), Gaps = 8/123 (6%)
 Frame = +3

Query: 3   SLQHKFCKTRSPVITRTQQTPHKFLIKSPPSHSKFQVKIKSPPVSLSPSKAN--ILNKKC 176
           S Q KFC+TRSPV+ +T++ PHKFLIKSPPS SK QVKIK+ PVS+SP+++   +  K  
Sbjct: 235 SHQQKFCRTRSPVLAKTRELPHKFLIKSPPSASKSQVKIKNLPVSISPTRSTTALGKKSS 294

Query: 177 PKVSTATKLRRSLSPARLANRLVSPLKNRMSIQMAGG--FMSGLKQRPSNS----ARSSV 338
           PKVS A K RRS SP+RLANRLVSPLKNR  +Q + G   MSGLKQRP++S     R SV
Sbjct: 295 PKVSAAVKFRRSFSPSRLANRLVSPLKNRKCVQKSDGLMMMSGLKQRPASSLVMPTRLSV 354

Query: 339 RRI 347
            RI
Sbjct: 355 ERI 357


>emb|CBI36769.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   SLQHKFCKTRSPVITRTQQTPHKFLIKSPPSHSKFQVKIKSPPVSLSPSKAN--ILNKKC 176
           S Q KFC+TRSPV+ +T++ PHKFLIKSPPS SK QVKIK+ PVS+SP+++   +  K  
Sbjct: 235 SHQQKFCRTRSPVLAKTRELPHKFLIKSPPSASKSQVKIKNLPVSISPTRSTTALGKKSS 294

Query: 177 PKVSTATKLRRSLSPARLANRLVSPLKNRMSIQMAGG--FMSGLKQRPSNS 323
           PKVS A K RRS SP+RLANRLVSPLKNR  +Q + G   MSGLKQRP++S
Sbjct: 295 PKVSAAVKFRRSFSPSRLANRLVSPLKNRKCVQKSDGLMMMSGLKQRPASS 345


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